Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0289 ATGGATTTCTTCGCTATAAATTTATCTTCCTCAGACTTCACTGTGCAGGAAATTTCAGATGCTGATATACCCAACGATGAATTTGCTGATATGCAATCGATACCTATTTCTGATTTGAATAGTTGCAGGAGGGAAGTGATGAATGATTGTTTCTGCATGGCAGCTTCTGCCATTCATCATAACCCAAAGTTCCGCCGTTGGATACATAAGGAGCCAACTCCCAAGCCAAAGCCAGTGGACATCAATCTGAAGACATTTTCGTTCCAAGAGTTGAGAGAGGCAACAAAGGGGTTCAAGAACAAACTTGGTCGAGGAGCATTCGGTACAGTGTATAGTGGGATTTTTACGTTGGAGGACGAACAGGTTGAGGTTTCTGTGAAACACCTGGAAAAAGCAGAGGATCAAGATGAGATTCGTGAGAAGGAGTTCGTGGCAGAAGTTCAAGTCATTGGTCTGACTCATCACAGGAATCTTGTCAGATTTTGGCATCGCCAAGCTGCTTATGAAAGACAAACCTCGAACGACAAAAGGAGGGAATTTGAGAGCGATGGTGGATCACGATATGTGGAAGCTTTAAATGATTTCACTAGGTTTGAGAGAATCACAATGGTTGGATTATGGTGCCTTTCTCCTAACCCAACGGTTCGACCATCTATGAAGAAGGCGACACAGATGTTGGAAAGGAACCATGGAGCTGATAATGAATCGGTGCAGTGTGAATGCATTCCAGGTTTTATCCCATTTAATACGAGAGATGTATCCTTAGGATGTCGCCCAGAAACTGTGATTAATTTTTGTACCCATCACCCTTCTCGGTTGAACTTCAAGCTGGAGGTTCTTGATGTTAGAAGCTACGGTCTGTTCATCCCAGGTCAACATGGGGAAGCCATGGCCTTGGTACACTTTGGTCGAGACGATGGATCGGGTCGTCAAGTCCACCGTGATCTCCAGAGATTGTTTTTGGAAGCGAGCAACGACGAATGCTCGCTGGGGTATTCGGATTTGATGTTTGGATTTCGAGGACAGCCATGA 1032 0.4467 MDFFAINLSSSDFTVQEISDADIPNDEFADMQSIPISDLNSCRREVMNDCFCMAASAIHHNPKFRRWIHKEPTPKPKPVDINLKTFSFQELREATKGFKNKLGRGAFGTVYSGIFTLEDEQVEVSVKHLEKAEDQDEIREKEFVAEVQVIGLTHHRNLVRFWHRQAAYERQTSNDKRREFESDGGSRYVEALNDFTRFERITMVGLWCLSPNPTVRPSMKKATQMLERNHGADNESVQCECIPGFIPFNTRDVSLGCRPETVINFCTHHPSRLNFKLEVLDVRSYGLFIPGQHGEAMALVHFGRDDGSGRQVHRDLQRLFLEASNDECSLGYSDLMFGFRGQP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0289 343 SUPERFAMILY Protein kinase-like (PK-like) 74 163 IPR011009 -
Lele24g0289 343 Gene3D Phosphorylase Kinase; domain 1 70 168 - -
Lele24g0289 343 ProSiteProfiles Protein kinase domain profile. 96 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0289 343 Pfam Protein tyrosine and serine/threonine kinase 98 162 IPR001245 GO:0004672|GO:0006468
Lele24g0289 343 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 81 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0289 Lele-ChrLele24 1861345 1865112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0289 86 169 Trihelix Transcription Factor Family AT1G23540 45.161 5.60e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele24g0289 PK_Tyr_Ser-Thr 6.9e-09 CL0016