Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0265 ATGGCAATTGTTGACGGCATTGTCAGTCTTATTCTTCTCATTATGCTTGTTCTCATCATCGTCCTCGTATTCTTTGCCTAAGGAAATCACTGCGTAAAGGCTAATGAACTTGAGAGGCCTCTTGTCTTGGATGATGCAAATTTGGGGCATGGCCCAAGTAGTGATTTGCCTATAGATTATGATCTTGAGGGTGCATCCATCCCCAATAAAAGCCATTTTCGCCCACCACGGCCTGCTGGACTTATTTATAAACCAAGGCTTTCTGCTGCTTCTTGCCATATGCCTCAAGACGTTGCTGTTGGCCAGACACTTAAACTGTCCCCAGCCCAGTTGGCAGAGTTTCACAAACATCATAGAAACTTTGAAACTGACAGACTGCAAGACTTTGTACAGAGATATATATTAGATCAAAGAAGTTGCCTCACTCTAGAGGTGATCACTGGTCCTTCTTGTGGGCTTCGTTGTTCTGTACAATCAACAATTCCATCCAAGCTACCACTGACCTTGGGAAGAGTTTCTCCAAGTGATTTGTTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCACTCATAAATTGGAATTTAGAGAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTTAATGGAACACTTTTGAATTCTCAACCAATCAACCATTTAGACCCTGGAAGCAGGCAATGGAGTAATCCAATTGAGCTTGCTAATGGAGATATCATAACACTAGGAATGACATCAAAAGTAATTGTTCATATTACTTCTCAAAATAAGATTCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGTCTAGGCGTCGAGGAGGGAAAAAGCTAGCCATGGAAGATGTTTGCTATTATCAATGGCCTTTACCTGGATTAGATCAGTTTGGACTGTTTGGCATTTATGATGGGCATGGTGGAGATGGTGCTGCAAGATATGCTAGCAAGTTAGTATTTCTATACTGCGTTTGTTAAGCTTGCATGAACCACTATTATGAGGGATGTACAGCAACGGTGCTTCTGGTTTGGGCGGATGGCAATGAAAATTTCTTTGCGCAATGTGCAAATGTTGGAGACTCTGCCTGTGTTATGAATGTCGATGGTAAAGAAATTAAGATGACGGAAGATCATAAGATAGCAAGTTATTCTGAAAGGCTACGAATTGAAGAGACAGGCGAACCTCTGAGAGATGGGGAAACACGTCTATATGGTATAAATCTTGCAAGGATGCTTGGAGACAAATTTCTAAAACAGCAGGATTCTCGTTTCAGTTCAGAGCCTTATATTAGTCAATCTGTGCGCATTGATCAGGCGAGCAGGGCTTTTGCCATACTGGCGAGTGATGGGCTATGGGATGTTATGAGCGGAAAGAAAGCAATTCAGCAAGTGCTTCAGATGAGGGAGAAATACTCCACAGATGATGATGAGTCAGCGGAAAAGATTGCAAATTTGTTGTTGAGTGAGGCGAGAACACTCAGAACAAAGGATAACACTTCAATAATTTTCTTAGATTTTGATACCTTCTCCAAATTCTCTTGTAAAGCTCTGTGTTAA 1560 0.4154 MAIVDGIVSLILLIMLVLIIVLVFFAXGNHCVKANELERPLVLDDANLGHGPSSDLPIDYDLEGASIPNKSHFRPPRPAGLIYKPRLSAASCHMPQDVAVGQTLKLSPAQLAEFHKHHRNFETDRLQDFVQRYILDQRSCLTLEVITGPSCGLRCSVQSTIPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLEKMKWELVDMGSLNGTLLNSQPINHLDPGSRQWSNPIELANGDIITLGMTSKVIVHITSQNKIHIPFGVGMASDPMSRRRGGKKLAMEDVCYYQWPLPGLDQFGLFGIYDGHGGDGAARYASKLVFLYCVCXACMNHYYEGCTATVLLVWADGNENFFAQCANVGDSACVMNVDGKEIKMTEDHKIASYSERLRIEETGEPLRDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQSVRIDQASRAFAILASDGLWDVMSGKKAIQQVLQMREKYSTDDDESAEKIANLLLSEARTLRTKDNTSIIFLDFDTFSKFSCKALC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0265 519 ProSitePatterns PPM-type phosphatase domain signature. 300 308 IPR000222 GO:0043169
Lele24g0265 519 Pfam FHA domain 168 243 IPR000253 GO:0005515
Lele24g0265 519 SUPERFAMILY SMAD/FHA domain 139 249 IPR008984 GO:0005515
Lele24g0265 519 SMART PP2C_4 257 505 IPR001932 -
Lele24g0265 519 FunFam Protein phosphatase 2C 70 136 270 - -
Lele24g0265 519 SUPERFAMILY PP2C-like 276 508 IPR036457 -
Lele24g0265 519 Gene3D - 268 517 IPR036457 -
Lele24g0265 519 ProSiteProfiles Forkhead-associated (FHA) domain profile. 167 218 IPR000253 GO:0005515
Lele24g0265 519 CDD FHA 141 249 IPR000253 GO:0005515
Lele24g0265 519 CDD PP2Cc 275 507 IPR001932 -
Lele24g0265 519 ProSiteProfiles PPM-type phosphatase domain profile. 263 507 IPR001932 -
Lele24g0265 519 Pfam Protein phosphatase 2C 332 500 IPR001932 -
Lele24g0265 519 PANTHER PROTEIN PHOSPHATASE 2C 257 503 IPR015655 GO:0004722|GO:0006470
Lele24g0265 519 Gene3D - 136 267 - -
Lele24g0265 519 SMART FHA_2 166 218 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0265 Lele-ChrLele24 1671940 1677875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0265 33 509 PP2C-type Phosphatase Gene Family AT5G19280 54.963 0.0 552