Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0263 ATGCAAGAATTTCTGGGTTCTGTTCGCCGATCCTTGGTTTTCAGGAGCCCAGGCGGGGAAGATGGAGGGTTTGGTGTTGTCGGTCTGGTTGATAAGATTGGCTCCAGCATTCGCAAATCACGAATTGGGCTCTTCTCTCAGCCACGCGTCAGGGCTCTGCAGCCGGTTCCTAAGGATAATACTCCTTCGATCCGGTGGCGGAAGGGCGAGTTGATTGGTTGTGGTGCCTTTGGTCGAGTCTACATGGGCATGAACCTTGATTCCGGGGAGCTTATTGCTGTCAAGCAGGTTTTAATCGCGGCGAGGAGTGCTTCGAAAGAGAAAACACAGGCCCATATTTTGGAACTTGAAGAAGAAGTGAAGCTTCTCAAGAATCTCAAACATCCAAATATTGTTAGATATTTGGGAACTGCCAGGGAGGAGGATTCCTTGAATATTCTCCTGGAATTTGTACCTGGAGGATCTATCTCATCACTCTTGGGGAAATTTGGATCCTTCCCTGAGTCTGTAATAAAAATGTATACAAAACAACTATTACTGGGTCTTGAGTACCTTCACAAGAATGGAATTATTCACAGAGATATTAAGGGTGCAAACATTCTTGTTGATAATAAAGGATGCATTAAACTAGCAGACTTTGGTGCATCTAAGAAAGTTGTTGAGCTGGCTACCATGAACGGTGCAAAATCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTCATTCTACAAACAGGGCATAGCTTCTCTGCTGATATTTGGAGTGTTGGATGCACCGTGATAGAGATGGCAACAGGGAAGCCCCCATGGAGTGAACAGTTTCAGGAGGTTGCCGCTCTTTTCCATATTGGGACAACTAAATCCCATCCACCCATACCTGACCATCTCTCTGCTGAGGCGAAGGATTTTTTGTTAAAATGCTTGCAGAAGGAACCGAACCTAAGGCCTTCTGCATCAGATTTGTTACAGCATCCATTTATAACCTGCGAGTATCAAGAATCTAATCCCACATTATGCAGTTCAGCTGTGGAATCTTGCAAGAGGGTGGTAACATCTGGAACAGACTCTAAAATCTCTTTGGGTTTTGTCAGGGGAATAGGTCTCAAGGATGTTTGTCAGATGGATAGCATAAGATGCTCATCTTTGTCTCCTGAGACTCTTTCAAAATCAGATTTCTATCAAGGAACCAGCAATTATGATGATGATATGTGTCAAATAGATGACAAAGATGATCTTTTTTTTGGTGCATCAGTGAAGTCTGAATCTCACATTTCATCAGATGATATAAAGAGTTTCAACCCAATGTGTGAACCTATGGATGAATGGCCATGCAATTTCGATGGAAGTCCAGATTTGGAGAGAAAGGGAACAAACTTGTCTCCTGGTCAGGCAATTAATAAGACAACGAGAAGCACTGAAACAGCTCAAAAGGTGGAGAACGAATTTTCATTTCCAAGTGAACCTATAGGAATTGATGACGATGAAGAAGTCACTGAGTCAAAAATTAGAGCTTTTCTAGATGAAAAGGCTCTGGAACTGAAGAAATTCCAAAGTCCTCTTTATGAAGAATTCTTTAGCGTATCAAACGCAGCTGTTCCTCCCATACCTGTTTCAATTGCACAAAGTGAAGCAGTTTCGGAAGTGTCACCAAAAAGCAGGTCACCTAGTCAGGCTAGCAGACGATACTCAATGGCTGATGGTGCTAATATTGCAAGGCATGGAAGTCATAAACAAAATCAACCTAAAGTTAGTGGTGCAAATAGTCGGCCTTTGCAGGAAATTCACCCATCTGAGCTTAACGAATGGAAAGAGACACTTCAATATGCTAAGATGGAATCATTTAGTGCTAGCTCAACTTTCTCAGAGATACAAAGGAAATGGAAGGAAGAACTTGTTGAAGAGCTTGAGAGGAAGAGAGACGTTGCATCATCTAAATGCTTTGATATGCAAGAAAATCTGAAATTAGCAGCATATTCATTTCTTCGGGTACTAGCTGTTCTCATGTTGACTGTTCCTCCATTGATATTCATAAGTTCCTACATATCTATTGAAGAGGCTCCACAAGCTTCTCTCAGAACTCACCCAATTAATGATTTAAGTCCAAAGAATACTTTAATCTAA 2124 0.42 MQEFLGSVRRSLVFRSPGGEDGGFGVVGLVDKIGSSIRKSRIGLFSQPRVRALQPVPKDNTPSIRWRKGELIGCGAFGRVYMGMNLDSGELIAVKQVLIAARSASKEKTQAHILELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHKNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATMNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSEQFQEVAALFHIGTTKSHPPIPDHLSAEAKDFLLKCLQKEPNLRPSASDLLQHPFITCEYQESNPTLCSSAVESCKRVVTSGTDSKISLGFVRGIGLKDVCQMDSIRCSSLSPETLSKSDFYQGTSNYDDDMCQIDDKDDLFFGASVKSESHISSDDIKSFNPMCEPMDEWPCNFDGSPDLERKGTNLSPGQAINKTTRSTETAQKVENEFSFPSEPIGIDDDEEVTESKIRAFLDEKALELKKFQSPLYEEFFSVSNAAVPPIPVSIAQSEAVSEVSPKSRSPSQASRRYSMADGANIARHGSHKQNQPKVSGANSRPLQEIHPSELNEWKETLQYAKMESFSASSTFSEIQRKWKEELVEELERKRDVASSKCFDMQENLKLAAYSFLRVLAVLMLTVPPLIFISSYISIEEAPQASLRTHPINDLSPKNTLI 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0263 707 Coils Coil 633 653 - -
Lele24g0263 707 MobiDBLite consensus disorder prediction 544 564 - -
Lele24g0263 707 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Lele24g0263 707 FunFam Serine/threonine-protein kinase STE11 62 156 - -
Lele24g0263 707 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0263 707 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0263 707 MobiDBLite consensus disorder prediction 544 592 - -
Lele24g0263 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Lele24g0263 707 Gene3D Transferase(Phosphotransferase) domain 1 65 358 - -
Lele24g0263 707 MobiDBLite consensus disorder prediction 574 592 - -
Lele24g0263 707 Coils Coil 106 126 - -
Lele24g0263 707 CDD STKc_MAPKKK 65 328 - -
Lele24g0263 707 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0263 707 SUPERFAMILY Protein kinase-like (PK-like) 65 329 IPR011009 -
Lele24g0263 707 FunFam Mitogen-activated protein kinase kinase kinase 2 65 356 - -
Lele24g0263 707 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0263 Lele-ChrLele24 1643877 1650640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0263 1 641 MAP Kinase Kinase Kinase AT3G06030 58.346 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele24g0263 Pkinase 1.3e-72 CL0016