Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0252 ATGAAGAAAAGCATGATCCAGAAACAACCATCTCCTGAGAATTTGAATGATGCATCAAGCAGCAGCACGGGACTCTCCTCAGATGACAAGGACATCGACTGCACCAATGCAATGTCTAATCAGCAATATATTTTGGTGAAAAACTCTGCTTTTCATAGCTCTCCCATCAGACTTGACCTGAATTATGCTCGCATGGCCATGGCAGAGATGGTGGGTACTTTCATTCTGATGTTCTGTGTGTGTGGAATCATTGCAAGCACGCAGTTGCAGAATGGACAAGTGGGCCTCCTGGAGTATGCAGCCACAGCAGGATTAACAGTGGTTGTGGTAATCTTCTCCATAGGGCCAATCTCTTGTGCTCATGTTAATCCAGCCGCCACAATAGCTTTTGCAACATTCGGTCAATTTCCATGGCTGAAGGTTCCCGTTTACATACTAGCACAGACGGTGGGTTCTGTGTTGGCAACATATATTGGTGGTCTCATCTATAGGATTAAATCAGATGTCATGATGACCAGGCCAATCCAAGGGCCTTTCTCAGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCTTAATGTTCCTTGCTACAGCCTTGACAAGTGAACTTCAATCAGTGGGTCATTTATCTGGTTTTGTTGTTGGAATAGCTATTGGACTTGCATTGTTAATCACCGGACCAGTTTCAGGGGGATCAATGAATCCTGCAAGATCATTAGGCCCAGCAATTTTGTCATGGAAATTCAAGGACATATGGATATACATCACAGCACCCATAAGTGGGGCTGTAGCAGGTGTTCTATCGTTTCGTTTTCTGCGTCTCAAACACCAACCATGCTCTACTTTCTCTCCTCTCCAATCACAACTCACGACCGCCATTCCATAA 885 0.4486 MKKSMIQKQPSPENLNDASSSSTGLSSDDKDIDCTNAMSNQQYILVKNSAFHSSPIRLDLNYARMAMAEMVGTFILMFCVCGIIASTQLQNGQVGLLEYAATAGLTVVVVIFSIGPISCAHVNPAATIAFATFGQFPWLKVPVYILAQTVGSVLATYIGGLIYRIKSDVMMTRPIQGPFSAFWVELIATFILMFLATALTSELQSVGHLSGFVVGIAIGLALLITGPVSGGSMNPARSLGPAILSWKFKDIWIYITAPISGAVAGVLSFRFLRLKHQPCSTFSPLQSQLTTAIP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0252 294 Gene3D Glycerol uptake facilitator protein. 20 281 IPR023271 -
Lele24g0252 294 PRINTS Major intrinsic protein family signature 103 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele24g0252 294 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele24g0252 294 PRINTS Major intrinsic protein family signature 140 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele24g0252 294 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele24g0252 294 PRINTS Major intrinsic protein family signature 64 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele24g0252 294 PRINTS Major intrinsic protein family signature 252 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele24g0252 294 Pfam Major intrinsic protein 62 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele24g0252 294 PANTHER AQUAPORIN NIP2-1 41 277 IPR034294 -
Lele24g0252 294 MobiDBLite consensus disorder prediction 1 28 - -
Lele24g0252 294 SUPERFAMILY Aquaporin-like 59 279 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0252 Lele-ChrLele24 1596140 1597375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0252 67 294 Major Intrinsic Protein MIP AT5G37810 38.428 4.12e-53 173