Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0246 ATGCAGCGTACGGAAAGCCTAGTACGGCAAAGGACGTCCTCTTCTTCCTGGGTTGAAAATCTCAGAGCTTGGAGGAGCAGTGAGCGAGAGCTACATAAAACGATGTCGTTGCAGAATGATTTTGCGATTTAGCAACCTCAGCAGACGAGTATGGATGAAGTTAATGAAAACTTGAAGAAACAAATAGCAGCACTTTTGCGGGTTATCTCTGCAGCTAATTACTATAAACAGGATAATGTTCCTTGCCAAATCGAAGAGGGTCTTTTCTTGGGTTCGGTTGGCGCTGCAGCCAACAAGGATGCACTTAAAAACTTTAATGTCACTCATGTTTTAACTGTGGCTAATACTCTGACACCGGCGCATCCTAATGATTTTGTATATAAAACTATAAATGTTGTTGACAGAGAGGACGTGGACATAAAACAATACTTCAACGAGTGCTTTGATTTTATTGATGAAGGCAAAAGACTTGGTGGAGGGACTTTAGTTCATTGCTTTGCTGGAAGATCCAGGAGTGTGACTATAGTGGTTGCATATTTGATGAAGACTCGTCAAATGAGCTTATCTCAAGCCCTGGAGCATGTGAAGAGCAGACGACGAACGGCATCTCCCAACCTTGGTTTCATTCGACAGCTGGAGGACTTTGAAAAATCTCTTCAAGAATCAAGTCCCAGTGCAGAACACAGGCGATTGGTGATACTTTGTAAACATAAAGATTCCGTAAGTGCAGCAGATGTGGCTCTGAAATTGGAAACTGTCGTTGGGATGAGCATCCGAACTAAAATTGATCGTGCTTTTTGGATTGGAGATGACGAAGCGGATGACAACAAATGTATCAGGCTTATCATAATTACAGGCACAAGTTCCCTCAATGTCGGCCTTCGCCATCATATCTGA 897 0.4281 MQRTESLVRQRTSSSSWVENLRAWRSSERELHKTMSLQNDFAIXQPQQTSMDEVNENLKKQIAALLRVISAANYYKQDNVPCQIEEGLFLGSVGAAANKDALKNFNVTHVLTVANTLTPAHPNDFVYKTINVVDREDVDIKQYFNECFDFIDEGKRLGGGTLVHCFAGRSRSVTIVVAYLMKTRQMSLSQALEHVKSRRRTASPNLGFIRQLEDFEKSLQESSPSAEHRRLVILCKHKDSVSAADVALKLETVVGMSIRTKIDRAFWIGDDEADDNKCIRLIIITGTSSLNVGLRHHI 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0246 298 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 36 223 - -
Lele24g0246 298 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 141 199 IPR000387 GO:0016311|GO:0016791
Lele24g0246 298 SMART dsp_5 80 218 IPR020422 GO:0006470|GO:0008138
Lele24g0246 298 CDD DSP 81 214 - -
Lele24g0246 298 Gene3D Protein tyrosine phosphatase superfamily 82 242 IPR029021 -
Lele24g0246 298 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 79 222 IPR029021 -
Lele24g0246 298 Pfam Dual specificity phosphatase, catalytic domain 88 217 IPR000340 GO:0008138|GO:0016311
Lele24g0246 298 ProSiteProfiles Dual specificity protein phosphatase domain profile. 80 221 IPR020422 GO:0006470|GO:0008138
Lele24g0246 298 FunFam Dual specificity phosphatase 12 82 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0246 Lele-ChrLele24 1570568 1575408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0246 83 220 Protein tyrosine phosphatase (PTP) family AT3G06110 61.594 6.84e-59 184