Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0245 ATGTCTCACATAACTGTCGAGAGGAACAGAAGAAGACAGATGAATGAACATCTCAAAGCCTTAAGATCATTGACTCCATGCTTCTATATCAAGAGGGGAGACCAAGCATCTATAATAGGGGGTGTGATAGAATTCATCAAGGAGTTACACCAAGTTGTTGAAGCGTTGGAGTCCAAGAAAAGGAGGAAGAGTCTGAGCCCTAGCCCTCATGGTGTTGATAGTCCCTTGGGAATTGGAATTGCAATTAATGGATCTGCAGATTCATGCAAGAAAATGGGAGGAGCAGTTAGCTGCAACTCTTCAGTTGCAGACGTGGAAGTCAAAATCTCAGGCCCCAATATGATACTGAAAGTGATCTCTCAAAGGATTCCAGGTCAACTGGCCGAGATCATAGCTGTTTTAGAAAGGCTTTCTTTTCAATTTCTTCATCTCAGCATAAGTAGCATGGACGATACGATAGGACTGGATTGTCAACTAAGTCTGGAGGAACTAGCAATGGAAGTGCAACGAAGCTTCTGCTCAGACGCTGTTACCAGTACTACTGCAGCAATCAGCGCTTAA 561 0.4367 MSHITVERNRRRQMNEHLKALRSLTPCFYIKRGDQASIIGGVIEFIKELHQVVEALESKKRRKSLSPSPHGVDSPLGIGIAINGSADSCKKMGGAVSCNSSVADVEVKISGPNMILKVISQRIPGQLAEIIAVLERLSFQFLHLSISSMDDTIGLDCQLSLEELAMEVQRSFCSDAVTSTTAAISA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0245 186 Gene3D - 1 64 IPR036638 GO:0046983
Lele24g0245 186 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 66 IPR036638 GO:0046983
Lele24g0245 186 FunFam Transcription factor MUTE 1 66 - -
Lele24g0245 186 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Lele24g0245 186 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Lele24g0245 186 SMART finulus 4 55 IPR011598 GO:0046983
Lele24g0245 186 PANTHER TRANSCRIPTION FACTOR FAMA 1 172 IPR044283 GO:0003700|GO:0010052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0245 Lele-ChrLele24 1567518 1568843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0245 1 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 60.891 3.04e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele24g0245 HLH 4.4e-08 No_clan