Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0243 ATGGGAAATCTATGGAGTAGCAGAAGAAGAAACAATTACTTTCCCCCTCCCCCTCCCCCTCACCTACCACCTCCTTATTACTATTCCGCTGAATCCCATCTTCCTCCTCCCCCCGTCCCACCTCAGCCCCAGGGCTATTATCTGACCAATTCTTACGTCAATACGCCTCCTCTCCCTCCGCCGCCACCGCAGCCGTCTCATCCTCACGCCCTTTCATTCAGTTACTCCAATGGGCAAAGCTATGGCCCCAACTATGGCAATTCTACGACGGGTCGTTTTCAGTACCAACCTTATTATGTAAATCAGGGTAATAGTGGCTGGCCTCCGATTCGTCCTCCTCTTGCTCCTGCCAATCCCCCACCGCCCTATGTCGATCATCAAGCCGCCAAGAAGGTAAAAAATGATGTCAATGTGCATAAGGATACTTTGCGGCTAGAGTTGGATGAGCACAATCCAGACCAGCACTTGCTTTCATTTGTTTTCGATGCTTTGTATGATGGGAGCATTTCTATAATATACTTTGCCAAGGAAGTAGAAACATGCAAGTTCATTCCACTGTTTCCTGAAATTGAGCCAGTCAGAATCCCTTTTCAGAAAGGAGCAGGACAAAAGTTTTGTCAGCCTTCAGGAACTGGCATTGACTTGGGCTTCTTTGAGTTGGATGATCTCTCAAGACCCTCACAAGGAGAAAGTGTCTTTCCCCTTTTGGTATGCGCTGAAACATATTCGAGAACTCCTCCAGCAGATGAAAACTTTGAGGATTCGATGGCTGATGTATCACCTAACAAGCAGATCACTCAAGCTGTTATTGAGAAAAGCAATGGTAGTGGTTCTTTCCAGGTAAAAGTAATTAGGCAGATTTTGTGGATTGATGGAGCCTGTTATGAATTACGAGATATATATGGAATTCAAGGCTCAGCAGCAGCAGATTTCAATGACAATGATCCTGAGAAGGAGGAGTGTGTGATATGCATGACTGAACCAAAGGACACTGCTGTCTTACCTTGTCGACATATGTGTATGTGCAGTGAGTGCGCCAAAGCTTTGAGGCTTCAATCAAATAAATGCCCTATATGCCGTCAATCCATTGAGGAACTTATAGAGATCAAGATAAATAATGGTAACCAATGA 1131 0.4527 MGNLWSSRRRNNYFPPPPPPHLPPPYYYSAESHLPPPPVPPQPQGYYLTNSYVNTPPLPPPPPQPSHPHALSFSYSNGQSYGPNYGNSTTGRFQYQPYYVNQGNSGWPPIRPPLAPANPPPPYVDHQAAKKVKNDVNVHKDTLRLELDEHNPDQHLLSFVFDALYDGSISIIYFAKEVETCKFIPLFPEIEPVRIPFQKGAGQKFCQPSGTGIDLGFFELDDLSRPSQGESVFPLLVCAETYSRTPPADENFEDSMADVSPNKQITQAVIEKSNGSGSFQVKVIRQILWIDGACYELRDIYGIQGSAAADFNDNDPEKEECVICMTEPKDTAVLPCRHMCMCSECAKALRLQSNKCPICRQSIEELIEIKINNGNQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0243 376 PANTHER MAHOGUNIN 1 370 IPR045194 GO:0061630
Lele24g0243 376 FunFam probable E3 ubiquitin-protein ligase LOG2 304 370 - -
Lele24g0243 376 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 304 370 IPR013083 -
Lele24g0243 376 ProSiteProfiles Zinc finger RING-type profile. 321 360 IPR001841 -
Lele24g0243 376 MobiDBLite consensus disorder prediction 25 75 - -
Lele24g0243 376 SUPERFAMILY RING/U-box 315 366 - -
Lele24g0243 376 MobiDBLite consensus disorder prediction 54 68 - -
Lele24g0243 376 Pfam Zinc finger, C3HC4 type (RING finger) 318 365 - -
Lele24g0243 376 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 320 360 IPR045195 -
Lele24g0243 376 MobiDBLite consensus disorder prediction 25 44 - -
Lele24g0243 376 MobiDBLite consensus disorder prediction 1 20 - -
Lele24g0243 376 SMART ring_2 321 359 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0243 Lele-ChrLele24 1546802 1550106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0243 50 376 C3H Transcription Factor Family AT3G06140 51.183 1.11e-96 290