Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0231 ATGTCAAGCCTTGAGTGCTGCTCAAACCCACCAATCCTCGACCCAAACTCTGGAGCAGGCCACGTTCGAAAACTCGGTGGCCTCAGCTCTTACGTCACCGGCGCCTCCTCTTCTAAGCACGCCATTCTTTTGGTCTCAGAAGTTTTTGGATATGAAGCTCCGATTCTAAGGAAGCTTGCAGACAAGATTGCAGCTAAAGGTTACTATGTGGTGGTTCCTGACTTCTTGTATGGAGATCCCTTTGCCTATGAAAATGCCAGCAGACCTCTGCCAGTTTGGCTAAAAGATCATGAGCCAGATAATTATGTGAAGGTGGTTCCCAAGGTGTCTCATGGATGGACTGTGAGGTACAACATGGAGGATGAAGAAGCTGTCATGGCTGCAGAGGCAGCCCATCACAAATTATTGGCTTGGTGTTTTGAATTTGTCTTGCCATTGAAGGCTTTGGTTGCATCATTAAGAATTCAGACGTTGATTTGTGTTTTGAACGATGCTCTCAAGAGCATGTACAATGCTGAGAAAAGGGGAAAGCGTCAGGTCATGATTAGGCCATCCTCAAAAGTCATTATTAAGTTCCTCTTGGTCATGCAGAAGCATGGATACATTGGGGAGTTTGAATATGTGGATGACCACAGGGCTGGCAAAATTGTGGTTGAGCTGAATGGAAGATTGAACAAATGTGGGGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAGGACATAGAACCCTGGACTGCAAGGCTACTTCCCTCAAGACAGTTTGGCTACATCGTCTTGACAACCTCAGCGGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGGAAAGTGTTGGGTTTCTTTTACTAG 858 0.4592 MSSLECCSNPPILDPNSGAGHVRKLGGLSSYVTGASSSKHAILLVSEVFGYEAPILRKLADKIAAKGYYVVVPDFLYGDPFAYENASRPLPVWLKDHEPDNYVKVVPKVSHGWTVRYNMEDEEAVMAAEAAHHKLLAWCFEFVLPLKALVASLRIQTLICVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKDIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0231 285 Gene3D - 225 285 - -
Lele24g0231 285 PANTHER 40S RIBOSOMAL PROTEIN S15A 161 284 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele24g0231 285 Pfam Dienelactone hydrolase family 32 80 IPR002925 GO:0016787
Lele24g0231 285 Gene3D alpha/beta hydrolase 27 97 IPR029058 -
Lele24g0231 285 FunFam 40S ribosomal protein S15a 225 285 - -
Lele24g0231 285 Pfam Ribosomal protein S8 162 285 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele24g0231 285 FunFam 40S ribosomal protein S15a 156 224 - -
Lele24g0231 285 Hamap 30S ribosomal protein S8 [rpsH]. 157 285 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele24g0231 285 ProSitePatterns Ribosomal protein S8 signature. 255 272 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele24g0231 285 SUPERFAMILY Ribosomal protein S8 160 285 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lele24g0231 285 Gene3D - 157 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0231 Lele-ChrLele24 1461165 1466710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0231 159 285 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.063 2.57e-87 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0231 24 1461165 1466710 Lele24g0231 24 1461165 1466710 ECH