Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0221 ATGATTCTAGGGGAAGACCCTGTAGGTATAAAACTGGCTATGAATAATGCCAGTGTAGGGCAGGAAAGAGAACTTGCCCATGAACCATACATTGGCTTAGAGTTTGAATCAGCAGATGATGCACTTAAGTTTTACACGTTATATGCAAAGCAAGCTGGATTTAAAGTTCGGATTGGTCAGTTGTATCGATCAAGAACTGATAAATCAGTTTCTTCCAGAAGATTTGTGTGCTCAAAGGAGGGATATCAACTCAATTCAAGAACCGGTTGTCCAGCATTTATAAGAGTACAAAAGCGTGATTCAGGGAAGTGGGTTATTGATCATTTCATTAAGGGCCACAATCATGAACTTGAACCTGAAGGTGAGGGTGAGGGTGAAAGTTTCCTTCCTAATTTGCAGCAGAAATATGCTACAGGTATAAAATCTGTTACTGAGGTGTCTCACAGACCAAGAAAAAAGATGCTTCAAGTCAAGGACGAGCATTGTTCCTTTGGCATGTTTAATTTTAAGCAGATGATGAAAGGAGATGAAGGGCCATCAAGAGCTGAGCCATATGTAGGTCAAGAATTCAGTTCATCTAATGAAGCTTGCCAATCTTATCAGGCATATGCAGCATCTGTGGGTTTCAGAGTTCGTATTGGTCAATTGTTTCGATCTAAAACTGATGGATTAATTACATCCCGACGATTTGTGTGCTCCAAAGAGGGGTTCCGCCACCCTTCAAGAGTTGGTTGTGGAGCTTATTTGAGAGTTAAGAGACAACCATCTGGGAAGTGGGTGGTGGATCGTCTTCATAAGGAGCATAATCATAATCTTGATGCTGAACAGGAGAATACGTCACAAAGTCTTCCTGCTTTAAATATTTTGACAGATGAGGTTGATGCAGGATTGGAACTAGGGAATTTGATGCTATGGAATCTAAGAGAAACTGCATGTAAATATATAGATGCTGGTGCCACGTCTCTTGACAAGTACAAACTTGCCTATGAGATTTTGCAAGAGGGGGGGAGGAAGCTATGTTGGCATCGACCTACCATTGATGCGGACTTTGAAACCAATGAAAGCCCCCACTTCATCATCTGTTTGAATTGTGCGCCAACGGATGATGGGATCATTTACATTATTCGATTGTCGCATATCAGGGTTCTTATTGAAATAGGCAACAACAGAAGAAAAAACAGAGTTGCAGCTGGAGATTTCTTACATTAG 1209 0.4111 MILGEDPVGIKLAMNNASVGQERELAHEPYIGLEFESADDALKFYTLYAKQAGFKVRIGQLYRSRTDKSVSSRRFVCSKEGYQLNSRTGCPAFIRVQKRDSGKWVIDHFIKGHNHELEPEGEGEGESFLPNLQQKYATGIKSVTEVSHRPRKKMLQVKDEHCSFGMFNFKQMMKGDEGPSRAEPYVGQEFSSSNEACQSYQAYAASVGFRVRIGQLFRSKTDGLITSRRFVCSKEGFRHPSRVGCGAYLRVKRQPSGKWVVDRLHKEHNHNLDAEQENTSQSLPALNILTDEVDAGLELGNLMLWNLRETACKYIDAGATSLDKYKLAYEILQEGGRKLCWHRPTIDADFETNESPHFIICLNCAPTDDGIIYIIRLSHIRVLIEIGNNRRKNRVAAGDFLH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0221 402 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Lele24g0221 402 Pfam FAR1 DNA-binding domain 200 272 IPR004330 -
Lele24g0221 402 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0221 Lele-ChrLele24 1419562 1423054 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele24g0221 FAR1 7.7e-19 CL0274