Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0219 ATGTTTCCGGCCAATCTATCAATACTGGAAGGTTCGGCTTTTCCTTCTTTTATTATTTCTTCGACACCGGGAATATGTGATAACGTATATCTCCATCACAAGGTTCATTCTAATTGCCGGATCAGGCGAGCCTTTGACTATCTTGATGGAGGAACTGAAAGTATGATTGTAGCGGAAAACCCTGTGGTTACAAAACTGGCAATGAATAATGCCAGTGGAGATCTGGAAAGAGAACTTGCTCTTGAACCATACATCGGGTTAGAGTTTGAATCAGCAGATGATGCACTTAAGTTTTACACTTTATATGCAAAGCAAGCTGGATTTAAAGTTCGGATTGGTCAGTTGTATCGATCGAGAACTGATGGATCAGTTTCTTCCAGAAGATTTGTTTGCTCGAAGGAGGGATATCAGCTCAGTTCAAGAACCGGTTGTCCAGCATTTATAAGAGTACAAAAGCGCGATTCAGGGAAGTGGGTTGTTGATCATTTCAATAAGGGCCACAATCATGAACTTGAAACTGAAGGCGCAGGTGCAAGTGAAAGTTGCCTTCCCAATTTGCAGCAGAAAGATGCTACAGGTATAAAATCTGTTACTGAGGTGTCTCACAGACCAAGAAAAAAGATGCTTCAAGTCAAGGACGAGCATTGTTCCTTTGGCATAATTAATTTTAAGCGGATGAGGAAAGGAGATGAAGGGCCATCCAGAGCTGAGCCATATGTAGGTCAAGAATTCAGTTCGTCTAATGAAGCTTGCCTATGTTATCAGGCATATGCAGCATCTATGGGTTTCAGAGTCCGTATCGGTCAACTGTTTCGGTCTAAAAATGATGGATTAATTACGTCCCGACGATTTGTGTGCTCAAAAGAGGGGTTCCAACACCCTTCAAGAGTGGGTTGTGGAGCTTATTTGAGAGTTAAGAGACAACCATCTGGGAAGTGGGTTGTAGATCGTCTTCATAAGGATCATAATCATAATCTTGATGCTGAACAGGAGGATAAGCCAAAAACTCTGCCTGCTTTAAATATTTTGACAGATGAGATTGATGCAGGATTGGTAAATGGTGACTTATTTAGGATAGATAACTACAACCCTGTTGCTAGAGGAGGCAGACAAAATCATATTAAAAGTGACTGGTACAAATCATGGAGCGGCCCTCAAGAACTCAGGAATCTGATGCTATGGAGTCTAAGAGAAACTGCATGTAAATATATAGATGCTGGTGCAACGTCTCTTGACAAGTACAAACTTGCCTATGAGATTTTGCAGGAAGGGGGAAGGAAGCTATGTTGGCATCGATTTGACGGTACTTTAAAAAGTCAGCTGTCACCTGAAAATCCAAGTTCCTATAAACAAACTAGTCTCTTAACCTTTGGGTGTGCCAGGAGGAAGGTGCGATGGCATGCGTCAAAACAAAAGGTTGTCGATATTCAAAGGCCATAG 1440 0.4181 MFPANLSILEGSAFPSFIISSTPGICDNVYLHHKVHSNCRIRRAFDYLDGGTESMIVAENPVVTKLAMNNASGDLERELALEPYIGLEFESADDALKFYTLYAKQAGFKVRIGQLYRSRTDGSVSSRRFVCSKEGYQLSSRTGCPAFIRVQKRDSGKWVVDHFNKGHNHELETEGAGASESCLPNLQQKDATGIKSVTEVSHRPRKKMLQVKDEHCSFGIINFKRMRKGDEGPSRAEPYVGQEFSSSNEACLCYQAYAASMGFRVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRVKRQPSGKWVVDRLHKDHNHNLDAEQEDKPKTLPALNILTDEIDAGLVNGDLFRIDNYNPVARGGRQNHIKSDWYKSWSGPQELRNLMLWSLRETACKYIDAGATSLDKYKLAYEILQEGGRKLCWHRFDGTLKSQLSPENPSSYKQTSLLTFGCARRKVRWHASKQKVVDIQRP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0219 479 Pfam FAR1 DNA-binding domain 254 326 IPR004330 -
Lele24g0219 479 Pfam FAR1 DNA-binding domain 97 172 IPR004330 -
Lele24g0219 479 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 66 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0219 Lele-ChrLele24 1410979 1414871 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele24g0219 FAR1 7.8e-19 CL0274