Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0212 ATGGGTTGTGTCCACGGCAAGTGTTGTAGCCGCTACCCGCCGCAGTCGGAGGGTGGTTCTGTGGACCGCCGAGAACTCGGCCCTTCCAGTTTCCAGCCGAAACACATACTTACTCAGAAATCATTGGAGTCTATTCCCGTTCCGTCCCACAACTTCACTTTGGAATACTCCGTCCTTACGCAGAGAGGATATTACCCTGACACGCCAACCAAAGAAAACCAAGATAGTTACTGCGTTAGGACACAAATTCAAGGCAACCCAAGTATACATTTCTTCGGTGTCTATGATGGGCACGGCCAATATGGTAGCCAGTGTTCGAACTTTGTTAAAGATAAATTGGTAGAGACACTATCAAATGACCAATCTTTGTTGGAAGACCCTGTTAAAGCATATGCTTCAGCATTTGTATCAACTAATCAAGAATTGAAAATTTCTGAGATTGATGATTCTATGAGCGGCACTACTGCAATCACAGTGCTTGTTATTGGAGATGTTCTATATGTTGCTAATGTTGGTGATTCGCGAGCAGTTTTAGCAGTTAAGGATGGGAATCGCGTTGTTGCTGAGGACTTGTCCTCTGATCAGACACCGTTCAGAAGAGATGAATGTGAGAGAGTGAAGCTTTGTGGGGCAAGGGTGCTGAGTGTTGATCAGGTGGAAGGGCTTATGGATCCAAATATTCAGACTTGGGGTGATGAAGAGAGCCAGGGTGGTGATCCTCCCAGGTTATGGCTTCCGAACGCGATGTATCCCGGAACCGCGTTTACAAGGAGTGTAGGGGATAGTTTAGCAGAGACCATTGGTGTCATTGCTATTCCAGAGGTGTCAATGGTTCGGCTAACGCCTAATCATCAATTTTTTATCGTTGCAAGTGATGGTGTGTTCGAGTTCCTATCTAGCCAAACTGTTGTTGATATGGCGGCAAGCTATACGGATCCCCGTGATGCATGCGCTGCAATTGCTGGGGAATCATATAAACTGTGGTTGGATCACGAGAGCCGAACAGATGATATAACAATTATCATTGTTCATATAAAAAGCCTGTCTAATTCAGTTACACGTGCGGCGTCAAGTGAGATCAATGTTAGTGCTTTAGCAAGGGCCAAGTCCAAGAGAGGAACTTCTGAGATATCTCCAACCACATCCGATGTTCATCGTTCCGTGGGGAATGACTTGTCTCATTTACAGTCCTGTCAGCATGTGGCCTCCGTGAGGAATGCAGCGATAGTGGTCCCGTCTCCGGCATGCCAAAGTGAATGA 1260 0.4635 MGCVHGKCCSRYPPQSEGGSVDRRELGPSSFQPKHILTQKSLESIPVPSHNFTLEYSVLTQRGYYPDTPTKENQDSYCVRTQIQGNPSIHFFGVYDGHGQYGSQCSNFVKDKLVETLSNDQSLLEDPVKAYASAFVSTNQELKISEIDDSMSGTTAITVLVIGDVLYVANVGDSRAVLAVKDGNRVVAEDLSSDQTPFRRDECERVKLCGARVLSVDQVEGLMDPNIQTWGDEESQGGDPPRLWLPNAMYPGTAFTRSVGDSLAETIGVIAIPEVSMVRLTPNHQFFIVASDGVFEFLSSQTVVDMAASYTDPRDACAAIAGESYKLWLDHESRTDDITIIIVHIKSLSNSVTRAASSEINVSALARAKSKRGTSEISPTTSDVHRSVGNDLSHLQSCQHVASVRNAAIVVPSPACQSE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0212 419 Pfam Protein phosphatase 2C 84 320 IPR001932 -
Lele24g0212 419 SMART PP2C_4 51 343 IPR001932 -
Lele24g0212 419 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Lele24g0212 419 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Lele24g0212 419 Gene3D - 44 347 IPR036457 -
Lele24g0212 419 SUPERFAMILY PP2C-like 45 347 IPR036457 -
Lele24g0212 419 CDD PP2Cc 71 345 IPR001932 -
Lele24g0212 419 MobiDBLite consensus disorder prediction 13 32 - -
Lele24g0212 419 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Lele24g0212 419 PANTHER PROTEIN PHOSPHATASE 70 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0212 Lele-ChrLele24 1367853 1370002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0212 1 350 PP2C-type Phosphatase Gene Family AT3G06270 72.000 0.0 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0212 24 1367853 1370002 Lele15g1517 15 8984420 8988913 CCT
Lele24g0212 24 1367853 1370002 Lele24g0212 24 1367853 1370002 ECH
Lele21g0216 21 1425481 1427805 Lele24g0212 24 1367853 1370002 hybridization
Lele22g0224 22 1354609 1356838 Lele24g0212 24 1367853 1370002 hybridization