Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0196 ATGGAAACCCAAGCTCCTTCTACTCCGACACCAGCCAAATCACCCTCATTGGCGCCGCCACCGCCGCCGCAGTCACCACAACCATCGGTCCACGATCAGCCACCGGGTGCTTCTGAAATGGAGGTGCAACATCGTTTGTCGGAAGATTCTCCATCTCATTGGGACCTGGATTGCCTGTTAGATTTCAGCTTGGACGAGAATTTAGTTCTCTCCTTAGACGATTATCATCCTAACTCAGAGGTTCCTCAAAATCTGGCGCTTCCTCCTCAAGATATTCCTAGTTCCGAGAAGGTTCGCAAGCGAGACCCCAGGTTGACTTGTTCTAATTTCCTGGCCGGTCGGGTCCCATGTGCATGCCCGGAGCTCGATGCTAAGCTTGAGGAAGAAGGTTTTCCTGGCAAGAAGCGCGCTCGCACCGTGCGGGCATCGGCTGGGATTGCACGGTGCCAGGTGCCTGGGTGTGAAGCAGATATTAGTGAGCTCAAAGGGTATCATCGGAGGCACAGGGTTTGTTTGCGTTGCGCGAATGCTAGTACGGTTATGCTTGATGGGCAGGCCAAGCGATACTGCCAACAGTGTGGAAAGTTTCACATATTATCAGATTTTGATGAAGGTAAACGAAGCTGTAGAAGAAAATTAGAGCGCCACAACAACCGAAGGCGTAGAAAGCCTACAGAAACCAGAGCTGCAGAAGATCATGAAGTTCAACCTGTCAAACAGACTGAGGATGATGTGGGAAAAGATAGTTCACATATAAGCAGTGACATAAACGACATAGAAATTGCCCTGGAGCATGAAGATGGACAACTTACTGCCCCATGTTTGGCTCCTGATACCATGAACACTAAAAATGATAGTTTTGCATCCTTTGTTGCTTGCGGTGAAGCACAGGTGAATGGTGGAAAAGAGAATTCTAACATTTCTTATTCACCACCATATTGTGAAAAGAGTGCTTACTCGTCTATGTGCCCAACAGGTCGGGTATCTTTTAAACTTTATGATTGGAATCCTGCGGAGTTTCCTAGAAGGCTACGGCATCAAATATTCCAGTGGTTGGCCAGTATGCCTCTTGAGCTGGAGGGTTATATCCGCCCTGGGTGCACAATTCTGACTGTTTTTGTTACCATGCCTAAATTTATGTGGACAAGTTTACTTAAAGACCCTCTGTATTATCTGCAAGACATAGTAGCTCCAGGAAAGATGCTATTTGGAAGAGGTACCATATTTGTTCATCTAAATGACATGGTCTTCTGCGTTTTGAAAGATGAAACTTCTGTGATGGAAGTTCAGATAAAGGTGCATGCACCCAGGCTTCACTATGTTCATCCCACATGCTTTGAGGCTGGAAAACCTATGGAATTTTTTGCTTGTGGAAGTAACTTGCTGCAGCCTAAGTTTCGGCTTCTCGTATCTTTCTCAGGAAAGTATTTAGAGTGTGAATATTGTGTTGCATCTCCTCATAACTGGGCAGGAGATGGCATTTCTTGTGCTTTTGACAGTCAGTTGTACAAGATTTGTGTCCCTCATACAGAGCCAAACATATTTGGACCTGCATTTATTGAGAGCCTCAGAGTTATTGCTAGACTCCAAGAAATCATCTCAGGGAAGGACGAGAATGTGCTGCCTGTCCAGTTTAACAAACCCAGTGACTTAGGTGGTGGCATTTGGGAGCCTCTGGTCAAGACTCCTTGGCACATTCTTGATGGTCGGTCCCTTGCTGGGCCTCTGAATGGTTTTGTTGCAGACTTGCCGCTGAGGGTGAGGGCTGTTGCAAATAGGCACTGTCTGTTTCTGTCATTGTTACTGTCTGCTCCTGCTTTTTTGCTATTGCCGCTGTCTGGTTCTCTTAGCCGTAGGACTTCACTCTTCCCTACTCAATTGCTGGTGGAGAATGAGTCTGGTTTATCAAACTTCATTCCTGTACTCATCGGGGACGCTGAAATCTGCTCTGAATTGGAGAGAATGCAGCAAAAACTAGATATATCTCTTCTTTCGAAACGAAGGCAGGATGCATCTGGCAGTTCTATATGCAGCTTCTGTGAAGCTTTTGCACTGAGACATACAGCATACTCAGACTTGCTTTTAGATATAGCATGGCTGCTTAAGGATCCTACTTCAGAAGATTTTCATAGAGCCATGACAGCTTCACAGATTCAAAGATTTTGTTATTTGATATACTTTCTCATGTGCAATGAATTAATTGTCATTTTGGGGAAAGTATTACGGAACTTGAATATTTTGACAGAAAGCACGGAAATGAGCAAAGTGATTAACAGAACGAGTGAGGCTGACATGACATTACTACTGAAACACACGTGTCAAGCTAGAGAATTCCTTTATCAGAAACATCATAGGGGTGGAGATTTAAACTTTCACGCTGTTTTTTCTGAAATGGAAGGACATAAGGTTGCTCCAAGCTGCTATCAAGATAACATGCCATCAGTTGTCACCATCAGCAATCAGGGTGCCGAGTCAAGGGCAGATGCTAAATTGGGAGTGAGAAGTCCAACTTGGCCTGACAAAAGTGGAAGCATACCTCTTTTGGGGAGTGATATTATAATGAACATGGAAGAGTTGCCTCGGAGATCTGGTTATCGACATCTCACGAGGGGATTCTTGTCGTCCCGGCCAGCCGTTCTCATGATTGCTTCAGTTGCTGTATGTCTTGGGGTTTGCGCTGCCCTCCTTCATCCTGGGAGGGTTGGTGAGTTTGCAGCATCTATGAGAAGGTGCTTGTTCCGCAAATCGTTGTAG 2754 0.4553 METQAPSTPTPAKSPSLAPPPPPQSPQPSVHDQPPGASEMEVQHRLSEDSPSHWDLDCLLDFSLDENLVLSLDDYHPNSEVPQNLALPPQDIPSSEKVRKRDPRLTCSNFLAGRVPCACPELDAKLEEEGFPGKKRARTVRASAGIARCQVPGCEADISELKGYHRRHRVCLRCANASTVMLDGQAKRYCQQCGKFHILSDFDEGKRSCRRKLERHNNRRRRKPTETRAAEDHEVQPVKQTEDDVGKDSSHISSDINDIEIALEHEDGQLTAPCLAPDTMNTKNDSFASFVACGEAQVNGGKENSNISYSPPYCEKSAYSSMCPTGRVSFKLYDWNPAEFPRRLRHQIFQWLASMPLELEGYIRPGCTILTVFVTMPKFMWTSLLKDPLYYLQDIVAPGKMLFGRGTIFVHLNDMVFCVLKDETSVMEVQIKVHAPRLHYVHPTCFEAGKPMEFFACGSNLLQPKFRLLVSFSGKYLECEYCVASPHNWAGDGISCAFDSQLYKICVPHTEPNIFGPAFIESLRVIARLQEIISGKDENVLPVQFNKPSDLGGGIWEPLVKTPWHILDGRSLAGPLNGFVADLPLRVRAVANRHCLFLSLLLSAPAFLLLPLSGSLSRRTSLFPTQLLVENESGLSNFIPVLIGDAEICSELERMQQKLDISLLSKRRQDASGSSICSFCEAFALRHTAYSDLLLDIAWLLKDPTSEDFHRAMTASQIQRFCYLIYFLMCNELIVILGKVLRNLNILTESTEMSKVINRTSEADMTLLLKHTCQAREFLYQKHHRGGDLNFHAVFSEMEGHKVAPSCYQDNMPSVVTISNQGAESRADAKLGVRSPTWPDKSGSIPLLGSDIIMNMEELPRRSGYRHLTRGFLSSRPAVLMIASVAVCLGVCAALLHPGRVGEFAASMRRCLFRKSL 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0196 917 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Lele24g0196 917 MobiDBLite consensus disorder prediction 224 251 - -
Lele24g0196 917 MobiDBLite consensus disorder prediction 80 99 - -
Lele24g0196 917 Pfam SBP domain 149 223 IPR004333 GO:0003677
Lele24g0196 917 MobiDBLite consensus disorder prediction 1 50 - -
Lele24g0196 917 SUPERFAMILY SBT domain 147 227 IPR036893 GO:0003677|GO:0005634
Lele24g0196 917 MobiDBLite consensus disorder prediction 12 30 - -
Lele24g0196 917 MobiDBLite consensus disorder prediction 214 251 - -
Lele24g0196 917 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 54 724 IPR044817 GO:0003677
Lele24g0196 917 Gene3D - 145 210 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0196 Lele-ChrLele24 1283464 1290018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0196 621 909 SBP-box Gene Family AT5G18830 33.555 1.06e-41 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele24g0196 SBP 5.6e-28 No_clan