Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0190 ATGTTCAAAAAAACAAGAACTTATAAAGAAGTGAGAAAAGGTGTTGTTGGTGATTGGTTTCGCTTTTGCATTGTATTTTACGAGCAGGCTGATCTTCAGTTAAACAAAGAAGTTTCAGATAATGGACCAAGTGGGAGGCGGCCAGATATTTCACTTCAAATCCCACCTAGACATGTAGGGTTAGGAAGTGCTCGCGGTGGAAGGTCTCTGGACCACTCTCAGAGCTTCTCTAGAGGGATTCTATTGCCACGAGGCTTTTTGCTGGCTTTGAGCTTCAAAAGGAAAGGCAATACAGCAGATGTGGAAAGAAGCAGCCTCCTCAACTCAGATCCCAAGGCAGCTTCAGACAGTCCAAATATGGCCAACTTAACATCTGCAATTTCATGGAAAAGATGTACTTCTCTTCCTGTCACGCCTGGTACAAAACTCTCCCCTTCAGTTTCTACACCTACTTCTGCAAGGACATACAGTGAACAGCCTAAACGCCATAAAGATGCTGTTGCTGCTGGTTCCAAGGTTTCAAGGTCCCTCTCTGTACCTGGGCGGAATATGGTTATGGTGAGATCTTTGTCCTTTGCTGCCCGGAGTGAGCATGCACAGCAAGATCAGAATGATACAGTTTGCAGAATCTGTTATGATGTCTGTGATGAAAGGAACACGCTTAAATTGGAGTGCAGTTGTAAAGGCGACTTGAAACTTGTTCATGAAGAATGTGCAATTAAATGGTTTAGCACAAAAGGAAATAGGAAATGTGATGTCTGTGGCCAAGAGGTTCAGAATTTACATGTAACATTGCATCGTTTGCCCAGCTCTGTTCAGACAGGAAGGAGACAGGTGCAGGGTCAGCAGAACATGAATCCTGAGAGATTAAGACTTCGTGGTGCTTGTCCTAATAAGCACAATATGCTATTTTTTCTTCCTCGAGCAGCTACTGAGTCAAGCAATCATTATATCAGCACCATTTTCCTTTACACTGGGTCTACTGGCATCTATTTTGCAGTCATCCTTGCCATAAAAGAGTATATATGGACATATGCTGCTCTCGAGTTTGCTCTTGTGGCTATAACAGTACACGTGTTCTATTCTATGTTGCATTTGAAGGTCCTTTATGCAATACTGCTTTCATCAGTTCTGGGTTTTGGTATGGCTATGAGCATCAACTATGTATATATCCAGTTTGTTTCTTGGCGTTCAAGTCTCCCATGA 1206 0.4287 MFKKTRTYKEVRKGVVGDWFRFCIVFYEQADLQLNKEVSDNGPSGRRPDISLQIPPRHVGLGSARGGRSLDHSQSFSRGILLPRGFLLALSFKRKGNTADVERSSLLNSDPKAASDSPNMANLTSAISWKRCTSLPVTPGTKLSPSVSTPTSARTYSEQPKRHKDAVAAGSKVSRSLSVPGRNMVMVRSLSFAARSEHAQQDQNDTVCRICYDVCDERNTLKLECSCKGDLKLVHEECAIKWFSTKGNRKCDVCGQEVQNLHVTLHRLPSSVQTGRRQVQGQQNMNPERLRLRGACPNKHNMLFFLPRAATESSNHYISTIFLYTGSTGIYFAVILAIKEYIWTYAALEFALVAITVHVFYSMLHLKVLYAILLSSVLGFGMAMSINYVYIQFVSWRSSLP 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0190 401 CDD RING_CH-C4HC3_MARCH 208 255 - -
Lele24g0190 401 MobiDBLite consensus disorder prediction 140 156 - -
Lele24g0190 401 Pfam RING-variant domain 208 254 IPR011016 GO:0008270
Lele24g0190 401 ProSiteProfiles Zinc finger RING-CH-type profile. 200 261 IPR011016 GO:0008270
Lele24g0190 401 SUPERFAMILY RING/U-box 202 258 - -
Lele24g0190 401 MobiDBLite consensus disorder prediction 100 119 - -
Lele24g0190 401 MobiDBLite consensus disorder prediction 140 166 - -
Lele24g0190 401 MobiDBLite consensus disorder prediction 38 70 - -
Lele24g0190 401 PANTHER OS02G0165000 PROTEIN 331 399 - -
Lele24g0190 401 MobiDBLite consensus disorder prediction 101 119 - -
Lele24g0190 401 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 264 IPR013083 -
Lele24g0190 401 SMART ringv_2 207 255 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0190 Lele-ChrLele24 1258459 1262386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0190 198 285 C3H Transcription Factor Family AT5G05830 34.409 1.06e-10 59.3