Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0189 ATGACTAGACTATTGAAGGAAGCTGAAGAGTCAGGAGCTATCATTGTAACAGGATTGGAGATGTTTTTAGGGCAGGCTTATGAACAGTATGAGAAATTTACTGGATTGCCAGGTAAGTTGAATATTACATATGCATTTGCTGCAGTTTTAACAGTGTCTTCTGCTAGAACAAATGTTGTCCTTGAATTTGAGGTCCCAAAAATGCAGGCCGACACTCCCACTCAGAGAGAACCCATGTTCCTCCTATTGGTACCTTCTTTCCACAAGCTATAATTGAGCCGAGCTGACCCATGGGCTTTTTCCATTAATTTATACTTCAATCATAAAAGCCTTCAATTTGGCCTCCGCCGCTGCTCCGGCTCAACACAGGATCCATGTGGCCTGACGCCTGAGCCCTTACCCCTTAGCATCGGTGGCATTTCTGAAAGAAGTCAAAATTGCTGTTTCAGTTCCGGCACTTCCCGAACCTTCAACCTCCGGTTTCCTCCGTCCATCCCCTCCGAAGTGGTTTATCGGGAGTGCAAATATTGTATTTTGGGTACTGGTGTGGTGCTGGAAGCTTGCTTTGAAGTTTTATTATCTGGGTTTTTGATGGACTGCAATAAAGAAGAGGCCTTACGGGCCAAGGTCATTGCTGAAAAGAAGATGGGAAGTAAAGATTTCATTGGGGCTCGTAAAATTGCTCTTAAAGCTCAGCAACTATATCCTGATCTGGAGAATATAACCCAAATGCTTATTGTATGCGATGTTCATTGCTCTGCTGAGAAGAAATTGTTTGGGAATGAGATGGACTGGTATGGAATTCTTCAAATTGGTCACTCATCTGATGAGATAATGATAAAAAAACAATACAGGAAGTTTGCCCTCCAACTTCATCCTGACAAGAACAAGTTTTCTGGTGCAGAAGCTGCATTTAAGCTAATTGGGGAAGCCCAAAGAGTACTTTTGGACAAAAATAAACGGGCTCTACTTGACATGAAGTATAAAGTTCCTATGAACAGAACTTCAAAGTCATATCATCCAGCACAGAAGGTTAATACAAATGTGAATGTTGGGATGCAAAACAATGTCAGGGCCAATTTTTCCAACATGAATCCTCAGAAGCAGCAGCAACCTAGGCAGTCAACTCAACAGGTTCCCAATGGTAGCCGCCCTACATTTTGGACTGCCTGCCCATTTTGTTCTAGTAGATATAAGGTTCACTCTGAAGCTGTGAATAGATCTCTTTCCTGTCAAACTTGTCATAGGTCCTTTATTGCATACGTGCTAGGTACATCAGTAGTGGCGGCGGCGGCTAATTCAAGTCGTCAATCTTTTGGCCAACAAAAAGATGGTTTAAATCATGGTGTTGATGTTGGATCTCAAGGTATGAATGCTGGGAATGTCAATACAAAGCCTTCTGCAAAGAAAGGCCCCAACATCTCTGATAAGCTGCATAGAATGAGAAAGAGGAAGAGGGTAGAAGAATCTAATGAAAGTACTGATTCCTTTGACAGCAATGAGTCTGAAGATGGTATGTTTGTTGACAATGATGGTGTTCCCGGTGAACAAAACTATCCAACTGATCAAGAACAGCATCGGCGTAGATCTGCAAGGTCTAAGCCTCAGGTTGTTTATAGTGAGAATGGGAGTGATGATGATGACGACCTTTCAAAGCCCTCAACTGGGGCCAAGGGAAGTGGCTCGTGTGGTGTGGAAGAAGACAATGGGGAGACAGCTAAAATGAATAATCTAAATAGCTCGGCTGGGGACCTGAAAGATGACCAGAAAGGGGTGAAACAGAAAGACAATCATTATTCTGAAGAGAGCTTACACAAGAGAAATGAGGAAACTCTGGACACGAGAGGAAAAGAAACAAACCAGGGCCCAAAGGGGACAGGAGAAGCAGCAGAAGGTCCGACCTTTTTTGTCTATCCTGATGCAGATTTTAGTGACTTTGAAAAGAACAAGAAAGAAGATAGTTTTGCAAACGGACAGATTTGGGCTATATATGATACAATTGATGGCATGCCGAGATTCTATGCTTTGATCAGGAAAGTTCTCTCTGCTGGGTTCAAGCTGCAAATAACATGGTTTGAAGCAGAGCCAGATGACGAGGACGAAATCAGCTGGGTAGAAAATAATCTGCCAGTTGCTTGTGGGAAGTATGTGCTTGGCAACACTGAAATTTCTGAAGATCGTCTTATGTTCTCACATCTGATTTCGTGTGAAAAGATTGGCCGCAGTACTTTCAAAGTTTATCCTAGGAAGGGTGAAACTTGGGCTGTGTTTAAAAATTGGGATATCAAGTGGTACGCTGATGTGGAATCTCATCAGATGTATGAATTTGACTATGTTGAAATTTTGTCCGATTATGTTGAAGGAGAGGGGGTATCTGTTGCATACTTGGAGAAGTTGAAAGGTTTTGTGAGTCTTTTCGCTCGAGCAAACAAGGGCAATATGGATTCATTTCGAATTCCATCAGCGGAGTTATTTAGATTCTCTCATAGGATTCCTTCATTTAAAATGACTGGTCAGGAAAGAGTAGGTGTCCATAAAGGATCTTTTGAACTTGATCCTGCATCTTTGCCGGAAAATCTTGAATAA 2586 0.4227 MTRLLKEAEESGAIIVTGLEMFLGQAYEQYEKFTGLPGKLNITYAFAAVLTVSSARTNVVLEFEVPKMQADTPTQREPMFLLLVPSFHKLXLSRADPWAFSINLYFNHKSLQFGLRRCSGSTQDPCGLTPEPLPLSIGGISERSQNCCFSSGTSRTFNLRFPPSIPSEVVYRECKYCILGTGVVLEACFEVLLSGFLMDCNKEEALRAKVIAEKKMGSKDFIGARKIALKAQQLYPDLENITQMLIVCDVHCSAEKKLFGNEMDWYGILQIGHSSDEIMIKKQYRKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDKNKRALLDMKYKVPMNRTSKSYHPAQKVNTNVNVGMQNNVRANFSNMNPQKQQQPRQSTQQVPNGSRPTFWTACPFCSSRYKVHSEAVNRSLSCQTCHRSFIAYVLGTSVVAAAANSSRQSFGQQKDGLNHGVDVGSQGMNAGNVNTKPSAKKGPNISDKLHRMRKRKRVEESNESTDSFDSNESEDGMFVDNDGVPGEQNYPTDQEQHRRRSARSKPQVVYSENGSDDDDDLSKPSTGAKGSGSCGVEEDNGETAKMNNLNSSAGDLKDDQKGVKQKDNHYSEESLHKRNEETLDTRGKETNQGPKGTGEAAEGPTFFVYPDADFSDFEKNKKEDSFANGQIWAIYDTIDGMPRFYALIRKVLSAGFKLQITWFEAEPDDEDEISWVENNLPVACGKYVLGNTEISEDRLMFSHLISCEKIGRSTFKVYPRKGETWAVFKNWDIKWYADVESHQMYEFDYVEILSDYVEGEGVSVAYLEKLKGFVSLFARANKGNMDSFRIPSAELFRFSHRIPSFKMTGQERVGVHKGSFELDPASLPENLE 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0189 861 MobiDBLite consensus disorder prediction 439 633 - -
Lele24g0189 861 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 198 861 - -
Lele24g0189 861 PRINTS DnaJ domain signature 284 299 IPR001623 -
Lele24g0189 861 PRINTS DnaJ domain signature 300 320 IPR001623 -
Lele24g0189 861 PRINTS DnaJ domain signature 266 284 IPR001623 -
Lele24g0189 861 SMART dnaj_3 263 320 IPR001623 -
Lele24g0189 861 MobiDBLite consensus disorder prediction 586 617 - -
Lele24g0189 861 Gene3D - 1 45 - -
Lele24g0189 861 ProSiteProfiles dnaJ domain profile. 264 328 IPR001623 -
Lele24g0189 861 MobiDBLite consensus disorder prediction 454 470 - -
Lele24g0189 861 SUPERFAMILY Chaperone J-domain 260 332 IPR036869 -
Lele24g0189 861 MobiDBLite consensus disorder prediction 361 383 - -
Lele24g0189 861 Pfam Domain of unknown function (DUF3444) 636 840 IPR024593 -
Lele24g0189 861 Pfam DnaJ domain 264 325 IPR001623 -
Lele24g0189 861 CDD DnaJ 264 317 IPR001623 -
Lele24g0189 861 Gene3D DnaJ domain 261 381 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0189 Lele-ChrLele24 1247916 1255424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0189 201 420 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.778 1.05e-26 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0196 21 1301665 1317273 Lele24g0189 24 1247916 1255424 hybridization
Lele22g0195 22 1228598 1236263 Lele24g0189 24 1247916 1255424 hybridization