Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0181 ATGACAGTTGGTGGGGGCGTAAAGAACAAGAAAAGCGGAGAAAAGAAGGAAAGAAAGAGAATGGAAATGGAGGTGGAATGGAAGCAGCTGATTAGGGTTCCAGTTATGTCTTTTCCTTATTTCCTTTTCGACATTGCCGTTCCTCTGTCTTCAGTTATTTTTCTTGCTGATTATTGCCATTATGGCTTGATGTCACTACCTGGCGTTTCTATTTTAGATGTGAACAGTAAGAATTATGCGATTTTGGCCATGACTACGGAGCTTTTGGACATTGAACCTCATGAGCTTAAATTTTTCTATTTCAAGGTTTACATATATATGTCGTCAGACCTTTTCACCACTAATGTTGTTTTGTTCCAATCATTTTTTTCAATCTCACGGGATCCTCCTTTCCCACAGAGCTTCAATTCCGTGCCGGTGGAGTACTCTCATCAGTCTCAGTATCCTCTAAGTCACCATCACCATCGCAATCTCATGACCAAGTTTCGGATCGGAGAAGCCTCCGGAGAAAGCAGTCATCACATGAATAACAGTGGCATGGTGGATTATCTGCTCCACAGCCACAACAACGACAACACTCCTCCTCATCAACAACAACCTTGTGGGTTTTATGGTACACCCGCTGGTTCTTCTTTTGATAAGCTGAGTTTCGCAGATGTTATGCAGTTTGCAGATTTCGGACCCAAGTTGGCCTTGAACCAGACCAAGAATAACTGTACCAGTGAAGGAGAAGAAGATCAGTCTGGGATGGACCCAGTTTTCTTCCTCAAGTTCCCTGTGTTAAGTGACAGGTCCTTGGAGGATCATCAGAATCTGATGGGGACAGGTGAAGAAGAAGAAGAAGAAGGAGTGATGAGAGAGGATGAAGTAGAAGAAGCTCGAGTCTCTGATAGTAATAATACTAATAATAAGTCGGTGCAGCAACATGGGTTTGTAGGAGAAGACATGGAGAAGAATAACAGTAACCCTACAAGCACAGTTCAGGAGAACAACAATAATACAAATAATAAGAGCAAAAGGAAGAGACCTAGAAGCATCAAAACCAGCGAGGAGGTAGAGAGCCAGCGTATGACTCACATCGCCGTCGAAAGAAACCGTCGGAAGCAAATGAACGAGCACCTTCGCGTCCTCAGATCCCTCATGCCCGGTTCTTACGTCCAAAGGGGGGATCAAGCTTCTATAATAGGCGGAGCGATAGAGTTTGTGAGGGAATTAGAGCAGCTTCTTCAGTGCTTGGAGTCACAGAAGAGAAGAAGGTTACAGGGAGAAGCTCATTCAAGGCAACAAGTTGGGGATTCTTCTTCTGTTGCAATTCAGGCGCAGCAACAAGCTTCATATTTTCCAGCTTTGGCGCCTTTGCCAAATGTTGAGTTTGAGAGTGGGCTGAGGGAAGAAACAGCAGAGAACAAGTCGTGTTTGGCTGACGTGGAAGTGAAGCTTTTAGGGTTTGATGCGATGATCAAGATCCTATCAAGAAGAAGACCAGGCCAGTTGATTAAGACCATCGCTGCACTCGAAGATTTGCAGCTTATTATCCTCCACACCAATATCACCACCGTTGAACAAACTGTTCTTTATTCTTTCAACGTCAAGGTTGCAGGTGATTCAAGTTTCACTGCAGAAGATATAGCCAGCTCTGTCCAACAGATATTCAGTTTCATTCACGAGAACACTGGAATATTAGCTAATGTGGCAGAGGGTGATGAAGACAAGATCTTGAATTCTGGTGTGTTGGAAAAATAA 1743 0.4383 MTVGGGVKNKKSGEKKERKRMEMEVEWKQLIRVPVMSFPYFLFDIAVPLSSVIFLADYCHYGLMSLPGVSILDVNSKNYAILAMTTELLDIEPHELKFFYFKVYIYMSSDLFTTNVVLFQSFFSISRDPPFPQSFNSVPVEYSHQSQYPLSHHHHRNLMTKFRIGEASGESSHHMNNSGMVDYLLHSHNNDNTPPHQQQPCGFYGTPAGSSFDKLSFADVMQFADFGPKLALNQTKNNCTSEGEEDQSGMDPVFFLKFPVLSDRSLEDHQNLMGTGEEEEEEGVMREDEVEEARVSDSNNTNNKSVQQHGFVGEDMEKNNSNPTSTVQENNNNTNNKSKRKRPRSIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLQGEAHSRQQVGDSSSVAIQAQQQASYFPALAPLPNVEFESGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLIILHTNITTVEQTVLYSFNVKVAGDSSFTAEDIASSVQQIFSFIHENTGILANVAEGDEDKILNSGVLEK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0181 580 MobiDBLite consensus disorder prediction 183 203 - -
Lele24g0181 580 CDD ACT_UUR-ACR-like 486 550 - -
Lele24g0181 580 Gene3D - 352 432 IPR036638 GO:0046983
Lele24g0181 580 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 432 IPR036638 GO:0046983
Lele24g0181 580 FunFam Basic helix-loop-helix transcription factor 345 420 - -
Lele24g0181 580 SMART finulus 360 411 IPR011598 GO:0046983
Lele24g0181 580 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 354 405 IPR011598 GO:0046983
Lele24g0181 580 MobiDBLite consensus disorder prediction 296 334 - -
Lele24g0181 580 MobiDBLite consensus disorder prediction 273 357 - -
Lele24g0181 580 Pfam Helix-loop-helix DNA-binding domain 355 406 IPR011598 GO:0046983
Lele24g0181 580 PANTHER TRANSCRIPTION FACTOR FAMA 260 551 IPR044283 GO:0003700|GO:0010052
Lele24g0181 580 CDD bHLH_AtFAMA_like 357 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0181 Lele-ChrLele24 1171708 1177129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0181 164 560 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 59.466 8.30e-142 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele24g0181 HLH 1.4e-09 No_clan