Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0170 ATGGCACATGCTTCTCCTCCTAAGTACTTTGTTCGCCTGGAGAATACAACTTCCAAAGACGATTTATATTTGAGGAAGAGGACTGGGACCGGGATGCGTCGGTGGCTTTGTTGTTCCTGTCATGTTGAAGAGCCTTACCCTTATGAAAACGAGCACCTTAAAAGCCCAAGGAACTATGGAGATGGTAATCCAAAAGGGCCAAAGGCTTCAGCTCCTGTTAAACCTGAAACACAAAAGGCTGCACCACCTATTGAAGTGCCAGCATTACCTTTAGATGAACTAAAAGAAATGACTGACAACTTTGGATCAAAGGCATTGATCGGTGAAGGATCTTATGGGAGGGTATATTATGCAACTTTAAACAATGGAAAGGCCGTGGCTGTGAAGAAGCTTGATGTTTCATCAGAACCTGAATCCAATGTCGAGTTTTTGACCCAGGTTTCAACGGTCTCAAGAATGAAGCATGAAAATTTTGTTGAGATGCATGGTTATTGTGTTGAAGGAAATCTTCGTATACTTGCATATGAGTTTGCAACTATGGGCTCTCTTCATGATATATTGCATGGTAGGAAGGGAGTTCAAGGGGCACAACCAGGGCCAACCCTTGACTGGATGCAACGAGTTCGAATTGCAGTTGATGCGGCAAGGGGGTTGGAATATCTACATGAGAAAGTTCAACCGGCTATCATACATAGAGATATCCGATCAAGCAATGTACTAATTTTTTATGATTACAAAGCAAAGATTGCTGATTTTAATCTTTCGAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCCACTCGAGTGTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACTGGTCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACAGGGAGAAAACCCGTTGACCATACCATGCCTCGAGGACAGCAAAGTCTGGTTACATGGGCTACTCCAAGACTGAGTGAAGATAAAGTCAAACAATGCGTGGATCCAAAACTGAAGGGAGAATATCCTCCTAAAGGAGTTGCAAAGCTGGCAGCTGTGGCAGCACTTTGCGTGCAGTATGAAGCCGAGTTTAGGCCGAATATGAGCATCGTGGTCAAGGCGCTGCAACCACTTCTGAAGGCGCTGCAACCACTTCTGAAGGCTCCTCCTCCTGCTCCAGCACCGGAAACTTGA 1206 0.4478 MAHASPPKYFVRLENTTSKDDLYLRKRTGTGMRRWLCCSCHVEEPYPYENEHLKSPRNYGDGNPKGPKASAPVKPETQKAAPPIEVPALPLDELKEMTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNVEFLTQVSTVSRMKHENFVEMHGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPAIIHRDIRSSNVLIFYDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKALQPLLKAPPPAPAPET 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0170 401 ProSiteProfiles Protein kinase domain profile. 101 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0170 401 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 35 388 - -
Lele24g0170 401 SMART tyrkin_6 101 379 IPR020635 GO:0004713|GO:0006468
Lele24g0170 401 FunFam PTI1-like tyrosine-protein kinase 3 65 177 - -
Lele24g0170 401 ProSitePatterns Tyrosine protein kinases specific active-site signature. 229 241 IPR008266 GO:0004672|GO:0006468
Lele24g0170 401 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Lele24g0170 401 Gene3D Transferase(Phosphotransferase) domain 1 179 388 - -
Lele24g0170 401 Pfam Protein tyrosine and serine/threonine kinase 106 379 IPR001245 GO:0004672|GO:0006468
Lele24g0170 401 MobiDBLite consensus disorder prediction 50 80 - -
Lele24g0170 401 Gene3D Phosphorylase Kinase; domain 1 73 177 - -
Lele24g0170 401 FunFam PTI1-like tyrosine-protein kinase 3 179 388 - -
Lele24g0170 401 SUPERFAMILY Protein kinase-like (PK-like) 82 379 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0170 Lele-ChrLele24 1107156 1110447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0170 36 387 Receptor kinase-like Gene Family AT4G02010 44.225 3.66e-90 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele24g0170 PK_Tyr_Ser-Thr 2.8e-46 CL0016