Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0161 ATGGCTTCTTCTCTGAATTCCCTTCTACTCTGTTTTCTGATACTGTGCCTGCCTTGTATTTGTGTTTTTGCCCAAACCAGAACAAGTAATATCAACGTGGGCAATTCTTTCACCGCAGGAGATGGCAATACCCCATGGGTGGTTTCACCTTCTGGGGATTTTGCCTTTGGATTTCAACCACATAAAAATAACAGTTTCTTCTTGCTCTCCATCTGGTATGCCAACATTCCGAACAAAACCATCGTTTGGTATGCGAATGGAGACAGTCCTGCTCCAAAGGGGTCAAGAGTTCAGATTACTGCAGCAGAAGGGCTTAAGCTTACTTATCCTGATGGTCGGATTTGGACACCAGAAAATAAGCCTACTGGTACTGTTGCTTCTGGTGCCTTGAATGACTCTGGCAACTTTGTTCTTCGGGATGGGAGATCTAACTCTGTCTGGGAGACCTTCAAGAATCCCAAAGACACCATGTTGCCCTCACAAACTTTGGAGAAGGGAGGAAAGCTTTCTTCTCGGAAGTCAGAGGCGGATTTCGCGCAGGGAAGGTTTCAACTTGTTCTTCAGGATGATGGTAATCTTGTGATGCATTCTGTAAACTTACCATCTGAGTTTGCTAATGAAAATTATTTTTATACTGGTACTGTTGAGTCCAATACATCAAGTCCTGGAATTCGACTGGTCTTCAATGAATCTTCTGGAGACTTTTATGTAAAGAGGGAGAACAATGATACATACGCCTTCTCAAACCAGATCATACCCCCTCCATCTCAATTTTATCTTCGAGCAACTCTTAATTTTGATGGAGTTCTCACTTTCTATCAACATCCTAAGAGTTCATCTGGAACTTGGACACCTATCTGGTCCAAGCCAGATAATATCTGTAGTGCTACAATCAAAGAAGGAACAGGCATTTGCGGATATAATAGCATTTGTAGATTGGGTGATAATAGTAGGCCAAATTGTACATGCCCACCAGATTATTCCCTACTAGATCCTGATGACCCAAATGGTAGTTGTAAACCAGATTTCGTACAGGGCTGTAAAGAAGATGAGCTTAGTCAAGGGAACGATCTATATGACTTTGAGGTGTTGACAGATATAGATTGGCCTCTCTCTGATTATGCGCTTCTAAGGCCTTTTACTGAAGATCAGTGCCGAAGGGCCTGCATGGAAGATTGCTTTTGTGCCGTTGCCATTTTCAGAGCAGGTGACAGCTGCTGGAAGAAGAGGTGGCCACTTTCAAATGGCAAGTATGACACGAGTCTTAATCGTGGCAAGGCCTTAATCAAAGTTAGGAAAGACAATTCCTCCCTAATTGGTCCTCCTGGTCGTCCTCCAATCATCGAAAGAAAGAATCGAGACACTTTGATTTTAGTGGTTTCTATCCTCTTGGGTAGCTCTGCCTTTCTTAATCTCATATTAATTGGAACATCCTGTCTAGGCTTTTTCTCCATTCAACAATTACAGAAGAAGCTTAAAAATGTATACCGAAGTGACAGTGCTGTTGAAACCAATTTGCGTTGTTTTACTTATAAGGAGCTTGAAGAGGCTACAAATGGATTCAAGGAAGAGTTAGGAAGAGGAGCTTTTGCTGTTGTTTATAAAGGAACCATATACATGGGTTCTTCAGTACCTGTGGCAGTCAAAAGGTTGAACAACTTCCTTTTTCAAGAAACTGTCGAGGAATTCAAGAATGAAGTGAATGTCATTGGTCGGACCCATCACAAGAATTTGGTTCGTTTGCTTGGGTTCTGTGAGGAGGGAACTGAAAGGATCTTGGTATATGAGTATATGAGCAATGGCACATTAGCAAGCCTTCTTTTCAGTGACTCAAAACCCAATTGGAACCTACGACTAAAATTGGCATTTGGGATTGCAAGAGGACTCGTTTATTTACATGAAGATTGTGGCACCCAGATCATCCACTGCGACATAAAGCCTCAAAACATACTCCTTGATGACTACTTCAATGCTCGTATCTCTGACTTTGGATTGTCCAAGCTCTTAAACATGAATCAGAGCCGAACCCACACTGCTATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAGAACATGCCCATCACAGCCAAAGTAGATGTCTACAGCTTTGGTGTATTGCTGCTGGAGATTGTCTGTTGCAGAAGAAGTGTGGACAATGAACCAGAGAATGAAGAGAGAGCAATCTTAACAGATTGGGCTTATGACTGCTACGCAACAGGATCTCTAGAAGCTTTGGTTGAAGAAGATGAGGAGGCACTGGATGAGAAGAAGAACTTGGAAAAGTTAGTAATGATTGCCATTTGGTGTATTCAAGAGGATCCAACTCTGAGACCCACAATGAGAAAAGTTTCTCAGATGCTTGAAGGAGTTGCTGAAGTGCCTGCTCCACCATGCCAGATCCTGAATAGTGTGACTCTAGATCCCTACATCTCAACTCACTTTGGATGA 2457 0.4245 MASSLNSLLLCFLILCLPCICVFAQTRTSNINVGNSFTAGDGNTPWVVSPSGDFAFGFQPHKNNSFFLLSIWYANIPNKTIVWYANGDSPAPKGSRVQITAAEGLKLTYPDGRIWTPENKPTGTVASGALNDSGNFVLRDGRSNSVWETFKNPKDTMLPSQTLEKGGKLSSRKSEADFAQGRFQLVLQDDGNLVMHSVNLPSEFANENYFYTGTVESNTSSPGIRLVFNESSGDFYVKRENNDTYAFSNQIIPPPSQFYLRATLNFDGVLTFYQHPKSSSGTWTPIWSKPDNICSATIKEGTGICGYNSICRLGDNSRPNCTCPPDYSLLDPDDPNGSCKPDFVQGCKEDELSQGNDLYDFEVLTDIDWPLSDYALLRPFTEDQCRRACMEDCFCAVAIFRAGDSCWKKRWPLSNGKYDTSLNRGKALIKVRKDNSSLIGPPGRPPIIERKNRDTLILVVSILLGSSAFLNLILIGTSCLGFFSIQQLQKKLKNVYRSDSAVETNLRCFTYKELEEATNGFKEELGRGAFAVVYKGTIYMGSSVPVAVKRLNNFLFQETVEEFKNEVNVIGRTHHKNLVRLLGFCEEGTERILVYEYMSNGTLASLLFSDSKPNWNLRLKLAFGIARGLVYLHEDCGTQIIHCDIKPQNILLDDYFNARISDFGLSKLLNMNQSRTHTAIRGTKGYVALEWFKNMPITAKVDVYSFGVLLLEIVCCRRSVDNEPENEERAILTDWAYDCYATGSLEALVEEDEEALDEKKNLEKLVMIAIWCIQEDPTLRPTMRKVSQMLEGVAEVPAPPCQILNSVTLDPYISTHFG 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0161 818 ProSiteProfiles Protein kinase domain profile. 519 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0161 818 FunFam S-receptor-like serine/threonine-protein kinase 487 597 - -
Lele24g0161 818 Gene3D - 154 297 - -
Lele24g0161 818 Gene3D Transferase(Phosphotransferase) domain 1 598 798 - -
Lele24g0161 818 Coils Coil 745 765 - -
Lele24g0161 818 ProSitePatterns Protein kinases ATP-binding region signature. 525 549 IPR017441 GO:0005524
Lele24g0161 818 ProSiteProfiles Bulb-type lectin domain profile. 22 151 IPR001480 -
Lele24g0161 818 Pfam Protein tyrosine and serine/threonine kinase 521 790 IPR001245 GO:0004672|GO:0006468
Lele24g0161 818 SMART serkin_6 519 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0161 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 798 - -
Lele24g0161 818 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 801 - -
Lele24g0161 818 SUPERFAMILY Protein kinase-like (PK-like) 501 791 IPR011009 -
Lele24g0161 818 Gene3D - 22 151 IPR036426 -
Lele24g0161 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 214 IPR036426 -
Lele24g0161 818 Pfam D-mannose binding lectin 80 164 IPR001480 -
Lele24g0161 818 FunFam Serine/threonine-protein kinase 154 297 - -
Lele24g0161 818 CDD B_lectin 40 153 IPR001480 -
Lele24g0161 818 SMART blect_4 36 153 IPR001480 -
Lele24g0161 818 PIRSF SRK 1 814 IPR024171 GO:0004674
Lele24g0161 818 CDD STKc_IRAK 525 792 - -
Lele24g0161 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 151 - -
Lele24g0161 818 Gene3D Phosphorylase Kinase; domain 1 483 597 - -
Lele24g0161 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0161 Lele-ChrLele24 1044960 1047416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0161 505 792 Receptor kinase-like Gene Family AT1G60800 41.837 1.32e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele24g0161 PK_Tyr_Ser-Thr 1.3e-46 CL0016