Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0157 ATGGCTTCAACTTTGGCGGAGCTTCTGGCAAAGGAAGGATTCAAAAAGAGCAGAAGAATTACAAGGTCGATATCTCCCCTGAAGTCTGATGCTTTAACTGCAAAGCCTCCACGTCACTCTTTCCACAAGCAACAAAGGAGACCTTCTATATCTGGTGACAGAATTTTAACCGAGAGAGCAAAGATTGATGTATTATTGAATAGTGACACAGCTAAGAACGTAAGGCCAAGGGATAATCTTGATAGAAGAGAAAAAATGGATGAAGAACTGAAGAATAAAAACGAAGAGCAACTTTGTAGCAGTACAGAGGTAGGTTTGAGTTTACATGATTTGAAATATGGATTTGCATGTTGGATTCCGAATTATAAGTTGTCAGCTTCTGCTCATCTTTACCTTAGTGCATTATATAAGATTCAGAGAAAAGATACGGCGTCAGCAAAGCATCTTTTGCAAGCGTTTTGCGATTCGCCTTTCGAGACACGGACAACATTGCTGCCTGAACTATGGGAGGATCTATTTTCTCCACATTTTTTCCAACTGAAAGAATGGTATGCTAAGGAAGTTGACATTCTAATCAATAGACCAAGCATGGCAAAAAAACGAAATCTTCTTGAAAAAGTCTATGAGGAACATTTGGATTCTGGAACTTACATGTTTGCTGTATACTACAAAGATTGGCTCACTGAAGGAATTGAACCTCCATCTGTTCCTTCTATCAATATTCCATCAATCTCTTCCTCGGGAAGTCGGCAGGGAAGTTTGCTTGGTCATTCGTCAGAGTTTTCTAGTCCCATTGATTCATTCTCATCACCTCAACCAACAGTCAGCAAAAGACTCTATCATTCTGTCTTTGGTAGCTTGAATAATGAGGAGGATAATGACACAGATACTTGCATAAGAGGCTGTTACGGTTCAGCTTCTTTTGAGAAAACATCTACAAAGGTATCTGAAATAGTGAAATTCACTTATCAAGATATCAAAGAAGACTCCCCTAAGCCAATTAAGAAAAGCTCTTCTCTTGAAGGATTATCTTTTCCAACCATTCCACGAGAATTTCTTTGTCCTCTAACTGGAAAATTATTGGAGGAACCAGTCACTATAGAGACTGGGCAAACCTTTGAACATGCAGCTCTCAAGTCATGGTTCCAAAAGGGACACAGAATATGTCCTGGTGACGATATGTCTACGGCAATGCATGTTCTGCTCATGCACCTAAAGAATTCTCCACCACATCACAAACCTCTAATTGTAGTCCTTTTGTTGCACTTTGATCTACTGATTTCACTTCTGGTCGAGTCTCAAACTTATAGCTCATACAGAGAGCAGGCGGTGAATTCGATTCCAGAGGCTCTCAATGCCAGCTTAAATGAAGAGAAAGTCCGAGAAAATTGTTGTACAGCGCTTCTTATCTTGGCTGGGCATTTTTCTTCCACTGGGAAAGAATTGACCAAGGGTAGCATTCTAAAAGAAGTTGGATATATAGTCAATAGTTCAGAAGTTGATACTTCTGATCATGATGAAGAGGATTTATTATGGGATGGAGCCTTTTCATTTGAAAAGGAAGAAGAACGGAGCAAAGAGTGGATGGTAAACTTGTTAGAATCAATGATTGTTGATGGAGAGAGTCCATTTTTGAAGTCTATCTCTATATGTTTAGACTCTGGCACCCAGATTTGGTCAGCATCCGTCATTTATGAGATAAAACAAGTCCTGGAAAATGGGGAACTAGAACTCAAGATTCTCGCTTCCATGTGCCTGCTTAATTTCAGAAACATATCAGAATGCAGAACACTTTTGACAACTTTGTCAGAAGATTTTGATGGTCCTCTTCACGAACTACTTGATGTGCCGTGGACTGCAAAGCAGCTGCTTGCGATTATTGCTGGCGTGGATTTAGCCCCCATTCATGATTTGTTGATAACTTCCATTGAAGCTAGGCCCAACAGAGAAGAACTTGCTGCTGTGGAGCTGAATGAAGTTATTGGAAGAGACCCCATTATTGATGACAGGCTCAGCTCCTCCGCCATTGATGAAGCTGGGAAAAGGAGAGAGGCTTGTGTTTCTGTAGTTGTTGGAGGAGATAGTAAAGCCAAATTGCTTCTGGTTGTTGGAGCTGGAAGAGATGAAGAGAGGCATGGCCATTGTATCTCAGAAACGGAGAAGATAGAAAGAAAGAAAGCAAATTATATGTGTGAACTTGGAAGGAGGAGGAGGTGA 2217 0.406 MASTLAELLAKEGFKKSRRITRSISPLKSDALTAKPPRHSFHKQQRRPSISGDRILTERAKIDVLLNSDTAKNVRPRDNLDRREKMDEELKNKNEEQLCSSTEVGLSLHDLKYGFACWIPNYKLSASAHLYLSALYKIQRKDTASAKHLLQAFCDSPFETRTTLLPELWEDLFSPHFFQLKEWYAKEVDILINRPSMAKKRNLLEKVYEEHLDSGTYMFAVYYKDWLTEGIEPPSVPSINIPSISSSGSRQGSLLGHSSEFSSPIDSFSSPQPTVSKRLYHSVFGSLNNEEDNDTDTCIRGCYGSASFEKTSTKVSEIVKFTYQDIKEDSPKPIKKSSSLEGLSFPTIPREFLCPLTGKLLEEPVTIETGQTFEHAALKSWFQKGHRICPGDDMSTAMHVLLMHLKNSPPHHKPLIVVLLLHFDLLISLLVESQTYSSYREQAVNSIPEALNASLNEEKVRENCCTALLILAGHFSSTGKELTKGSILKEVGYIVNSSEVDTSDHDEEDLLWDGAFSFEKEEERSKEWMVNLLESMIVDGESPFLKSISICLDSGTQIWSASVIYEIKQVLENGELELKILASMCLLNFRNISECRTLLTTLSEDFDGPLHELLDVPWTAKQLLAIIAGVDLAPIHDLLITSIEARPNREELAAVELNEVIGRDPIIDDRLSSSAIDEAGKRREACVSVVVGGDSKAKLLLVVGAGRDEERHGHCISETEKIERKKANYMCELGRRRR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0157 738 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 346 406 IPR013083 -
Lele24g0157 738 PANTHER OS04G0584500 PROTEIN 563 628 - -
Lele24g0157 738 MobiDBLite consensus disorder prediction 250 273 - -
Lele24g0157 738 SMART Ubox_2 351 412 IPR003613 GO:0004842|GO:0016567
Lele24g0157 738 SUPERFAMILY RING/U-box 342 399 - -
Lele24g0157 738 Pfam U-box domain 348 404 IPR003613 GO:0004842|GO:0016567
Lele24g0157 738 MobiDBLite consensus disorder prediction 20 52 - -
Lele24g0157 738 ProSiteProfiles U-box domain profile. 347 443 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0157 Lele-ChrLele24 1020119 1026354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0157 292 390 U-box Gene Family AT3G54850 31.313 1.25e-11 66.2