Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0152 ATGTCAGTTCCTCTATGCATTGAATTGAACCCAACAAGACAGCTAATCCAAGGCTTGAGCTGTTCTATTCTGATTGGTGTTGAGGGAAAATTAGAATATGGCATAATCCATACGGATTACAAGTTTCCCAAGATGGAAATGTACAAGGAAAAGGAATTTTCAACTTGCTTTAAAGAAAGGGCAATGGGATCAAAGATTTGGGGGGATCCAATCATTAGAGGCTCTCAGACCCTCACTCTTTCTCATCACATTCATGCTGCAATGGGAATGGATTCAATTTCATCAGAAAAGCTTCGTTCAATTTCAGATTATACGTCAACAATAGGAGAGCTAACAAGGACCACTTTCCCTAGTTTTCTCCCTCAAAGGATCAGTGATCAAGAAGAAATCACCCAAGTAGAACAGAAAAATCAATCCCTTTCTGAATTCAATCGCATTTGTACTCCCAATGCTTCAACCCCAGGAACCAGAGAAAGTTTCATTCCTCTAAATCTGTTGGAAACACTTGCAGCATTACCAAGAACAGACGCATCTGATGAGTCAGCTTCTTCAACTGCTACACCTAGATTTCCATATTTGACACTGTTTCTGCAGGATCCCTCCATGTTATTTTCATCATCCTCAAAGATCACAGAGTCTGTAGGCAAGCCCAAAAATTGTGAATCTCAGCCAACAATTTCAGAACCTTCATTTTCTCTGTCCCAGTGTCATGCAATTCAGAGCCAGGCGGTTACGGATCCACTCAAAATGAATCAGAATCTTAAAAACTTCCGATCCAAGTCTCTTCATGACTACTGCTTGAGCACCACCAAGACTCAGCCTATGAAGTTTGCTGGACGAGGCAAGCTGTTTAAGGGGGTGAGGCAAAGACATTGGGGAAAATGGGTTGCAGAGATTAGACTACCAAGGAATAGAACGAGGGTTTGGCTGGGAACGTTTGACACAGCTGAAAATGCAGCCATAGCCTATGACACAGCAGCATACATACTTCGTGGAGAATATGCTCAACTGAACTTTCCAGATCTAAAGCATCATATTAAGGTCAATTCTTTGAATGGAACAACAGCTGCCCTACTGGAGGCAAAGCTTCAAGCAATATCACAAGGAATTTCTTCTCCTAGAGTGCCCACTGATGCCCTGCCACGATCATTGGATAAGAACCCAGTTGAGAACGCCAAAATCAATGGTAAAATTCAGAATCCAGCTAAAAAAGAATGGCAGTTTGAGATAGAGAACAAGGTTGGAGCTGATACAATTGAGAGAGGCAAAAATAATCATCAAGTGATATCGGACGTGGAAGCTGTTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATTCGCTTTTAATCTCCGATTCATGA 1374 0.4178 MSVPLCIELNPTRQLIQGLSCSILIGVEGKLEYGIIHTDYKFPKMEMYKEKEFSTCFKERAMGSKIWGDPIIRGSQTLTLSHHIHAAMGMDSISSEKLRSISDYTSTIGELTRTTFPSFLPQRISDQEEITQVEQKNQSLSEFNRICTPNASTPGTRESFIPLNLLETLAALPRTDASDESASSTATPRFPYLTLFLQDPSMLFSSSSKITESVGKPKNCESQPTISEPSFSLSQCHAIQSQAVTDPLKMNQNLKNFRSKSLHDYCLSTTKTQPMKFAGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAENAAIAYDTAAYILRGEYAQLNFPDLKHHIKVNSLNGTTAALLEAKLQAISQGISSPRVPTDALPRSLDKNPVENAKINGKIQNPAKKEWQFEIENKVGADTIERGKNNHQVISDVEAVQLSRMPSLDMDIIWDSLLISDS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0152 457 SUPERFAMILY DNA-binding domain 283 341 IPR016177 GO:0003677
Lele24g0152 457 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 139 452 - -
Lele24g0152 457 SMART rav1_2 283 346 IPR001471 GO:0003700|GO:0006355
Lele24g0152 457 CDD AP2 282 342 IPR001471 GO:0003700|GO:0006355
Lele24g0152 457 FunFam Ethylene-responsive transcription factor 2 282 341 - -
Lele24g0152 457 Pfam AP2 domain 284 332 IPR001471 GO:0003700|GO:0006355
Lele24g0152 457 Gene3D AP2/ERF domain 283 341 IPR036955 GO:0003700|GO:0006355
Lele24g0152 457 ProSiteProfiles AP2/ERF domain profile. 283 340 IPR001471 GO:0003700|GO:0006355
Lele24g0152 457 PRINTS Ethylene responsive element binding protein signature 306 322 IPR001471 GO:0003700|GO:0006355
Lele24g0152 457 PRINTS Ethylene responsive element binding protein signature 284 295 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0152 Lele-ChrLele24 958681 960296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0152 161 452 AP2-EREBP Transcription Factor Family AT4G13620 43.333 1.67e-65 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele24g0152 AP2 2.5e-12 CL0081