Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0149 ATGAAGCTCAAGCATCTCTGCGTCATTTTACCTGCAGATTCTGCTGAGTTTAAGCATAATCACCCACCATCAAAACTGAACCAATCTTCCCAGAAAGAAACCAAGAGGAAGAAACAACAACACAGGACTTGTGGGGGTCAAGTTCTTGCCTTCCTTCGTGATTCTCTGAGCAAATTATATGTCACAAACTGTTCGAGGTTTCGCCACAGTGAAGTGGGGAAAGGGAACCAACAAGGCTCATCTGTCGTACTGTTTCATGACATGGATGGAGTTCAACTCACTGCCAAGATTGGGGGGGACAGCCCAAGAATCTTCAGCTTCGCTGAGCTTTACATAGGTTCTAATGGTTTCAGTGAGGATCATGTGCTGGGAAGTGGAGGATTTGGCAGAGTTTACAAGGCTGTTTTGCCCAGTGATGGAACAGTGGTTGCTGTCAAATGTTGCTTGGCAGAGAAAGGGCAACAATTTGAGAAGACTTTTGCAGCTGAGTTAGCAGCCGTGGCCCATCTTCGACACAAGAACCTTGTCAGGCTCAGAGGTTGGTGTGTTCATGAAGACCAGTTGTACCTTGTCTATGATTACATGCCTAACCTCAGCCTCGACCGGATACTCTTTCGCCGGCCGGAGAATCCAAATGCCGAGCCTCTTCTTGGTTGGGGAAGGCGTGGGAAAATCATTAAAGGCTTGGCCGCTGCATTATACTATCTTCATGAGCAACTAGAGACTCAGATCATTCACAGGGATGTGAAAACCAGCAATGTGATGCTTGATTCCCAGTATAATGCTCGGTTGGGCGACTTTGGCTTGGCAAGGTGGCTGGAACATGAGCTTGAATATAATCATAGTCAAAGCAGGAAAACAACATCAACCAAAATTGACCCTTTCAGGTTGGCAGAGACAACAAGAATTGGTGGCACAATTGGGTATTTGCCCCCTGAGAGTTTCCAGAAAAAAAGCATCGCTACTTCGAAATCTGACGTGTTTAGCTTTGGCATAGTTGTTCTAGAAGTGGCATCTGGAAGGAGAGCTATTGACCTAGCATACCCTGATGATAAGATCATTTTGCTTGACTTTGTCAGAAGGCTATCTGATGAAGGAAAGCTCCTAGCAGCAGGGGATGCTCGTCTACCAGATGGTTCCTATAAGCTTTCTGAGATGGAACATTTAATTCACATAGGTCTTCTTTGTACACTTCATGAATCGCAATCAAGGCCAAGCATGAAATGGATTGTAGAAGCACTTTCTGATGTTTCAAGCCCGTTACCAGCTCTTCCTTCTTTTCATTCCCACCCTTTATATATCACTTTATCTTCTCCATCTGATACAAGTCTCAGCAGCGCAAATGCCTCCAGCACTGTCACAGACAATGTCAGCACAATCACAAACTATTCTTTATCCAAGTATGTTACAGCAAATGGGAGAACAATCTACATGACTGCAGAAGATAGGAACAGCGGAATCTCATCTGCGAAGAGCATGTATTGCCACGCTTCGTTTCCTGTGGTTGAAGCTCCAAGGGAAATATCATACAAGGAACTTGCCTTGGCTACGGATCATTTTTCAGAGTCAAGGAAGGTAGCAGAGCTGGACTTTGGAACTGCCTACCATGGAATCCTTGAGGATCGTTACCATGTCATGGTGAAACGCCTTGGAATGAAGACTTGCCCTGCACTTCGCGAAAGATTCTCTAATGAACTGCGAAATCTAGCGAGGCTTCGCCACCGGAATTTGGTGCAGCTTCGAGGATGGTGTACAGAGCAAGGGGAAATGCTTGTTGTGTATGATTACTCAGCAACAAGACTCCTCAGTCACCATCTTCTCCATCATAACAACAATCATCATAGAGATGGATGTTCTGTCCTGCAATGGCATCATAGATACAATATCATAAAATCACTAGCTTCTGCCATTCTTTATCTTCATGAGGAATGGGAAGAACATGTTATTCACAGGAACATCACTTCTTCAGCTGTTGTCCTTGAGCCGGATATGAACCCGAGACTCAGCAGTTTTGCCCTGGCTGAATTTTTTACCCGAAATGAGCATGGCCATCATGTAATCAAAGACACCAGCAAATCGGCTAGAGGGATTTTCGGCTACATGTCGCCGGAGTATATAGAATCAGCCGAAGCTACCTCCGCTGCCGATGTTTACAGCTTTGGCGTGGTGGTGCTCGAAGTTATAAGTGGACAGATGGCGGTGGACTTCCGGCAGCCCGAGGTTCTGTTGGTGAAGAAGGTTCATGCATTTGGGACAAGAAAAAGACCACTGGAGGATTTAGTAGACATGAGGCTCAACGGAGAGTACAATTACAAAGAACTTATGAGATTGGTGAAGCTAGGAATTTCATGCACCAGATCTGACCCACAATTAAGACCAAGCATGAGACAAATAGTGAGCATCCTTGGTGGAAATGACAAATTGATCATGGGAAAAAACCAGAAGGAAAGCACGGAAGAATGGAAAGAAAGGAATGCTTATTCATTGTCATTGATCAGGAGAATCAAAGCTCTGGGAATACGTTGA 2526 0.4501 MKLKHLCVILPADSAEFKHNHPPSKLNQSSQKETKRKKQQHRTCGGQVLAFLRDSLSKLYVTNCSRFRHSEVGKGNQQGSSVVLFHDMDGVQLTAKIGGDSPRIFSFAELYIGSNGFSEDHVLGSGGFGRVYKAVLPSDGTVVAVKCCLAEKGQQFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRPENPNAEPLLGWGRRGKIIKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYNHSQSRKTTSTKIDPFRLAETTRIGGTIGYLPPESFQKKSIATSKSDVFSFGIVVLEVASGRRAIDLAYPDDKIILLDFVRRLSDEGKLLAAGDARLPDGSYKLSEMEHLIHIGLLCTLHESQSRPSMKWIVEALSDVSSPLPALPSFHSHPLYITLSSPSDTSLSSANASSTVTDNVSTITNYSLSKYVTANGRTIYMTAEDRNSGISSAKSMYCHASFPVVEAPREISYKELALATDHFSESRKVAELDFGTAYHGILEDRYHVMVKRLGMKTCPALRERFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSATRLLSHHLLHHNNNHHRDGCSVLQWHHRYNIIKSLASAILYLHEEWEEHVIHRNITSSAVVLEPDMNPRLSSFALAEFFTRNEHGHHVIKDTSKSARGIFGYMSPEYIESAEATSAADVYSFGVVVLEVISGQMAVDFRQPEVLLVKKVHAFGTRKRPLEDLVDMRLNGEYNYKELMRLVKLGISCTRSDPQLRPSMRQIVSILGGNDKLIMGKNQKESTEEWKERNAYSLSLIRRIKALGIR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0149 841 FunFam Receptor like protein kinase S.2 195 420 - -
Lele24g0149 841 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Lele24g0149 841 FunFam Receptor like protein kinase S.2 91 194 - -
Lele24g0149 841 PANTHER - 78 416 - -
Lele24g0149 841 Gene3D Phosphorylase Kinase; domain 1 91 194 - -
Lele24g0149 841 Gene3D Transferase(Phosphotransferase) domain 1 602 827 - -
Lele24g0149 841 Gene3D Phosphorylase Kinase; domain 1 484 596 - -
Lele24g0149 841 SUPERFAMILY Protein kinase-like (PK-like) 102 450 IPR011009 -
Lele24g0149 841 MobiDBLite consensus disorder prediction 18 42 - -
Lele24g0149 841 Gene3D Transferase(Phosphotransferase) domain 1 195 419 - -
Lele24g0149 841 FunFam Receptor like protein kinase S.2 598 826 - -
Lele24g0149 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Lele24g0149 841 Pfam Protein kinase domain 118 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0149 841 ProSiteProfiles Protein kinase domain profile. 520 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0149 841 SMART serkin_6 117 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0149 841 Pfam Protein tyrosine and serine/threonine kinase 524 802 IPR001245 GO:0004672|GO:0006468
Lele24g0149 841 SUPERFAMILY Protein kinase-like (PK-like) 499 802 IPR011009 -
Lele24g0149 841 ProSiteProfiles Protein kinase domain profile. 117 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0149 Lele-ChrLele24 941444 943969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0149 501 802 Receptor kinase-like Gene Family AT5G55830 36.928 7.66e-52 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele24g0149 PK_Tyr_Ser-Thr 1.5e-29 CL0016