Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0138 ATGGAGCTCTTCTCAGAGGCTTTGGAAGTAACTTCACCTGGAGGATTTCCTGATCATCCCCACAGAGGTTTCGAGACCGTCACCTACATGCTCCAGGGAGCCCTAAGCTATGAAGATTTTGGTGGACACAAGGCTACTTTAAGAACCGGTGACGTTCAGTGGGTGAGGGCCGGAAGAGGAATAGTTCACTCAGAAATGCCAGCAGAAGAAGGAACCCACACCGGACTCCAACTCTGGATCAATTTATCTTCCGAACATAAAATGATTGAACCTCGGTGCCAAGAGGTCGTGAGCAAGGAGATACCGAGGGTAGAGAGAGACGGAGCAGAAATTAGGGTTTTGGCTGGAGAAGCATTAGAGGTTAAAGCTCCGGTGTGCAGCAAGACTCCGATCGTGTTGCTGGATATCACTGTGAGGCCCGATTCACAGGTGCATTTGAGAACCCCAGAATCATGGTGGAACTACTTGGTTTACGTGATTGAAGGAGAGGCTGTGGTGGGGTGTGAGTCATCAACGGCAATAAGGGCGGAGCAGGTGGCAGTGCTGGGCGGAGGAGATGGGGTGAGCGTGTGGAACAAGTCGCCGGAAAAGAGGGTGAGGATGGTGGTGGTAGGTGGAGAGCCGTTGAAGGAGAAAGTGGCGCAGAGGGGACCATTTGTGATGAACACAGAGTCAGAGATAGAGGAAGCGGCGGAGGATTTTCGTCTGTGTATAACACGATGCGAGAAATAA 732 0.515 MELFSEALEVTSPGGFPDHPHRGFETVTYMLQGALSYEDFGGHKATLRTGDVQWVRAGRGIVHSEMPAEEGTHTGLQLWINLSSEHKMIEPRCQEVVSKEIPRVERDGAEIRVLAGEALEVKAPVCSKTPIVLLDITVRPDSQVHLRTPESWWNYLVYVIEGEAVVGCESSTAIRAEQVAVLGGGDGVSVWNKSPEKRVRMVVVGGEPLKEKVAQRGPFVMNTESEIEEAAEDFRLCITRCEK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0138 243 Gene3D Jelly Rolls 102 209 IPR014710 -
Lele24g0138 243 CDD cupin_pirin_C 130 208 - -
Lele24g0138 243 Pfam Pirin C-terminal cupin domain 134 235 IPR008778 -
Lele24g0138 243 Gene3D Jelly Rolls 6 235 IPR014710 -
Lele24g0138 243 PANTHER PIRIN-RELATED 8 240 IPR012093 -
Lele24g0138 243 PIRSF Pirin 3 241 IPR012093 -
Lele24g0138 243 CDD cupin_pirin_N 14 82 - -
Lele24g0138 243 Pfam Pirin 13 80 IPR003829 -
Lele24g0138 243 SUPERFAMILY RmlC-like cupins 10 236 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0138 Lele-ChrLele24 867604 869054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0138 15 235 Calmodulin-binding Proteins AT3G59220 53.604 4.62e-86 255