Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0134 ATGGTGAACCTCATGGACTGGCAGAAGCAGCAGCAGCAGCAGCAACAGCAGAGTGGGAATGCCAACAATGGAAACGGAGGAATGATGTACGTGAAGGTCATGACAGATAACCAACTGGAAACTCTCCGGGAGCAAATCGCTCTCTATACCTCCATTTGCGAGCAGCTCGTCGAGATGCACAAGACTCTCACCGCTCAGCAGGATCTTGCAGGAGTTAGGTTGGGAAATATATACTGTGACCCATTGATGACTTCTTCTGGGCACAAAATAACTTCCAGACAGAGGTGGACTCCAACGCCTGTGCAACTTCAAATTCTTGAGCGTTTATTTGATCAGGGGAACGGAACTCCAAGCAAGCAAAAGATCAAGGAGATTACTGCTGAACTCAGCCAGCATGGCCAGATTTCTGAAACAAATGTGTATAATTGGTTCCAGAATAGGCGTGCTCGATCAAAAAGAAAGCAGCAAAATGTGGCACCTAATAACGCTGAATCTGAAGTGGAGACTGAAGCTGAATCTTCCAAGGATAAGAAAACAAAACCCGAGGAGTTTCAGTCCCAACATAGTGCATCAACTAGGGCTGAAGATTTGTGCTTCCAGAATCATGAAGTGTGCTCTGACTTGCACTACTTGACTCCAGAGTCCTGTAAACCAGAATCCATGTTTCCATCAGATGGCAGTCTGAAAAATTCAAGAAGTTTCGGCCAAATGTCTGTTTTTGATGGAATGCTATCAAACTCGAGGGATGGCTATATTACTGGAAAAATGCAAGTGCCAGGAAGCTACAATTTATACCAGCAACCTGGAGACTACAACATGACGGGTTGA 828 0.4529 MVNLMDWQKQQQQQQQQSGNANNGNGGMMYVKVMTDNQLETLREQIALYTSICEQLVEMHKTLTAQQDLAGVRLGNIYCDPLMTSSGHKITSRQRWTPTPVQLQILERLFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPNNAESEVETEAESSKDKKTKPEEFQSQHSASTRAEDLCFQNHEVCSDLHYLTPESCKPESMFPSDGSLKNSRSFGQMSVFDGMLSNSRDGYITGKMQVPGSYNLYQQPGDYNMTG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0134 275 Pfam Homeodomain 93 153 IPR001356 GO:0003677
Lele24g0134 275 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 273 IPR044559 GO:0003700
Lele24g0134 275 MobiDBLite consensus disorder prediction 168 184 - -
Lele24g0134 275 SUPERFAMILY Homeodomain-like 91 156 IPR009057 -
Lele24g0134 275 SMART HOX_1 91 158 IPR001356 GO:0003677
Lele24g0134 275 MobiDBLite consensus disorder prediction 1 27 - -
Lele24g0134 275 Gene3D - 95 159 - -
Lele24g0134 275 MobiDBLite consensus disorder prediction 1 25 - -
Lele24g0134 275 CDD homeodomain 93 155 IPR001356 GO:0003677
Lele24g0134 275 MobiDBLite consensus disorder prediction 151 190 - -
Lele24g0134 275 ProSiteProfiles 'Homeobox' domain profile. 89 154 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0134 Lele-ChrLele24 842367 844746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0134 4 275 Wox Gene Family AT4G35550 50.336 8.36e-91 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele24g0134 Homeodomain 7.6e-19 CL0123