Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0117 ATGGAGTGTGTGGTGCAGGGCATTATAGAAACACAGCATGTCGAGGCCCTCGAGATTCTCCTACAAGGTTTGTGTGGTGTTCATAAAGAGCGATTGAGAATCCATGAAATATGCCTCAAGAGTGGTCCCCACCTTGGAGCTGTAGCTTCGGAGGTTAGACTCTTGTGTGATCTTGAACAGGCTGAACCATCATGGACCGTCAGACATATAGGTGGTGCAATGAGAGGTGCTGGTGCTGAGCAAATTTCAGTTCTGGTCAGGGCAATGGTGGAAAGCAAAGTAAGCAAGAATGTACTGCGCATGTTTTATGCGCTGGGGTACAAGTTAGACCATGAATTGTTGAGGGTGGGCTTTGCTTTCCATTTCAACAGGGGTGCACCAATCAATGTAACTGTGTCATCGGTCAATAAAATGCTGAAGCTGCACGCAACTGATGAGGCTGTGCCAGTAACACCTGGTATTCAGATGGTGGAAGTAACTGCCCCTGCTACTTCTGAAACCTATGCTGAAATTGTTTCTGCCGTGTCATCCTTTTGTGAATACCTTGCACCGCTTCTGCATCTATCAAAACCAGGCATTTCCACCGGAGTTGTTCCTACTGCTGCTGCAGCCGCTGCGTCTCTTATGTCAGATGGTGGGGTGGTCCTTCTTCAGCATGGTGGATATGTGATGGATGGGACTGTGGTGATTGGAGCTTTGGTTTTGGAAGGAATGTTGGAGAAGAAAGGAGGAGGTTTGGTTGTGGTAGTGATGCTGTGGAGGAACTATAACCTTTCATGTTATGGTGGAATATGTGTGTGTGTGTGTGTATTGTTGCAATATGCTGCAATTGTTCTACTGGAAAGTCATATCCAAATCAAAAGCGGAAAAATTTTGGCTCAGCAACAAAACCCACATGCGGTCTCGTACTCTCTGCAACAGCAACAAATTGATTCGCAGGAAATAAACAGTGAAGCTGAAGCAGATGTTAAAACATTCTCAATAAGACAATATGCTTTTGCTTGCCGTCAGAGAAGTCTCCTTCAAAGCTGGCCATTTGCAGAGAAATACCTGCAAATGTGTTTTGATCGTGGTCTGAGAAATGTGTTGCCACCTTTTGGGCTGCGTGATAATAATAATAATAATAATAACTCATCAGTTTCTGAATCGTCACATAATGCTATCCCAAACTTGAATGATCCTTCTGACGAAGATTATTATGATGATAAGAATGTTAAAGTTTTGAAATCTGAATCATCACCAGACCATCATCATAATCCCCTTGAACTGATGAAGAAGCAGAATGTCATGAACCACGGTGATTCTGGTTTTTCGCTGTTCGATGAAGCAATATCGAAAGCGAGGACCAGCCTGCTGCCAGAAGAGGGTATGATTTCAGCCCCACCAGATTGTGTTAAAAAGAGCAGCCACATACTGAATTGTTGTTCATCAAAGTCATCATCGGGCAAGTTGGATAGAAGAAGAAGAAGAAAAGGAAGATGCAAGAAAAGATCAATGGCGGATATTTTAGCAGTAGCAAATCGTTGTACTTTGGAAGAAATCTATAGGATAAATCGGTTCTCTTACGCTGCTGCAACTGGGAATATTATTGAAGGGTATCGTCATGAAACAGCAACTCTTCATGAGAATGATCCTAAAAGCACTGAAAGGGATGATCATGGGGTGGCTAATTTTCATGTTAATGTAACTTCTATGGCTAAGTCCTTCCTCCAAGTGGCGGCAACTGAGGAGGCTGCACCCCCACTTCGAGTGATCCAGATGGAAGGATTGGTTATCTTGAAGATAATTAAACATTGTAAGGACCATTCACCTACATTAGTCACCGGACAACTTCTTGGGCTTGATGTTGGCAGTGTCCTTGAAGTTACTAACTGTTTCCCCTTTCCGATAAGGGAAGAGGATGAGGAAATTGAGGCTGATGGTGCCAATTACCAGCTTGAAATGATGAGGTGCTTGAGGGAGGTTAATGTTGACAATAATACTGTTGGATGGTACCAATCTACATTGCTAGGTTCCTTTCAGACTGTGGAGCTTATTGAAACTTTCATGAATTACCAGGAGAACATAAGACGCTGTGTTTGCATAATATATGATCCATCAAGGTCTGATCAAGGTGTCCTAGCTCTGAAGGCCTTGAAGCTCTCTGACTCATTCATGGAACTCTATCGCAGCAACAATATTACAGGGGAGAAACTGAGGGAGAAAAACTTGTCATGGGTAGATATCTTCGAGGAGATACCTATCAAAGTTTCAAATTCAGCCCTTATCAGTGCCTTTATGACTGAGCTGGAACCTGATACACCAGTAACCCAGTGCGATTATGATCGTCTCCAATTGTCAACTAGTTCGTTAATGGAGAGGAATATGGAGTTTTTGATTGAATGCATGGACGATTTGTCAATTGAACAACAGAAGTTTCAATTTTACTACCGGAGTTTGTCACGCCAGCAGGCCCAGCAGCAAGCTTGGCTTCAGAAGAGAAGGGCGGAAAATATGGCACGTAAAGCTGCTGGAGACGACCCATTGCCTGAGGAAGATCCGACGAACCCCGTTTTCAAGCCAATCCCTGAGCCATCGCGATTGGACAGCTTCCTCATAACAAATCAAATTGCAAACTACTGCAACCAAATTAACGGTGTATCAGGGCAGAGCTTCAACAGACTCTATTTGATGAAGGCTCTACGGGACGATTGA 2694 0.4365 MECVVQGIIETQHVEALEILLQGLCGVHKERLRIHEICLKSGPHLGAVASEVRLLCDLEQAEPSWTVRHIGGAMRGAGAEQISVLVRAMVESKVSKNVLRMFYALGYKLDHELLRVGFAFHFNRGAPINVTVSSVNKMLKLHATDEAVPVTPGIQMVEVTAPATSETYAEIVSAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGVVLLQHGGYVMDGTVVIGALVLEGMLEKKGGGLVVVVMLWRNYNLSCYGGICVCVCVLLQYAAIVLLESHIQIKSGKILAQQQNPHAVSYSLQQQQIDSQEINSEAEADVKTFSIRQYAFACRQRSLLQSWPFAEKYLQMCFDRGLRNVLPPFGLRDNNNNNNNSSVSESSHNAIPNLNDPSDEDYYDDKNVKVLKSESSPDHHHNPLELMKKQNVMNHGDSGFSLFDEAISKARTSLLPEEGMISAPPDCVKKSSHILNCCSSKSSSGKLDRRRRRKGRCKKRSMADILAVANRCTLEEIYRINRFSYAAATGNIIEGYRHETATLHENDPKSTERDDHGVANFHVNVTSMAKSFLQVAATEEAAPPLRVIQMEGLVILKIIKHCKDHSPTLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNITGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNMEFLIECMDDLSIEQQKFQFYYRSLSRQQAQQQAWLQKRRAENMARKAAGDDPLPEEDPTNPVFKPIPEPSRLDSFLITNQIANYCNQINGVSGQSFNRLYLMKALRDD 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0117 897 Pfam C-terminal region of eIF3h 704 895 IPR045810 -
Lele24g0117 897 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 584 686 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele24g0117 897 FunFam Eukaryotic translation initiation factor 3 subunit H 564 773 - -
Lele24g0117 897 MobiDBLite consensus disorder prediction 370 391 - -
Lele24g0117 897 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 580 897 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lele24g0117 897 ProSiteProfiles MPN domain profile. 585 718 IPR037518 -
Lele24g0117 897 SMART pad1_6 584 717 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele24g0117 897 Gene3D Cytidine Deaminase, domain 2 535 773 - -
Lele24g0117 897 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18 1 201 IPR019095 GO:0003712|GO:0006357|GO:0016592
Lele24g0117 897 CDD MPN_eIF3h 583 846 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lele24g0117 897 Gene3D - 1 190 - -
Lele24g0117 897 MobiDBLite consensus disorder prediction 829 854 - -
Lele24g0117 897 MobiDBLite consensus disorder prediction 370 400 - -
Lele24g0117 897 FunFam Mediator of RNA polymerase II transcription subunit 18 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0117 Lele-ChrLele24 731566 749367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0117 648 897 Eukaryotic Initiation Factors Gene Family AT1G10840 82.400 3.46e-148 436