Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0072 ATGTTGCCTGTTTGCTCAGCCACCCCAAGCTATTCATTATCTTCCCAGATTCCACTGTATGGGGGATCCGTGTATCCATTGCAGAAGGATTTTGAAGGTAGATGCATTATGGATGACGTACATCTAGGTTTGCAAAATGGAACCCACTCCCTGAGGAATCCATTTATTGCACAAGCTACAAAGTCAGTCTACTCTAGCGTTGCTAGTAGCGCTGAACAATCGGTATATGTGGATTTCCCTGGCAGATTTTCCTCTCCAAATGAACCAGGACACCTTGAGGGCAAATTTACAAACACTTGGAATTGTTCACCAGTGACAACAAGTGGACACCATTCATTTACTAAGGGAGAGCTCATATATGTTGAAAATTATGATTCATCATCTGTCCCAGAGAGATTGATGGACCTAACTGAACAGTCAACTGAAGGATCAGAAGCTTTATTAAGTACTGACATTGTGTCAGAGAAGCTCATCCCTACGCCTGAATCGATTATAGTGGACAATGAATCATTAGGCACCACAAAAGAAAGTATTGGTGATACTCTTTCTGGGATTAGCAAGTCATTTAATGCATCAATTAGTGAGGGAGAAAATGTTTTACAAAGTTCACTTGATACGGCCACTTCTTTGATGAGATCGGTCATTGAGAATGTTACTAAATCTGTTGACGATGCTTTTGGTGAAGCCCTTTCTTCTGTCAATCAATCAGGGGAATTAGCTAATAAGAAATTGACTAGCTTTTCAAGTGATCTAAGCGGAATCACAAGCAAAGTACCTGCTTTTGCTATCGATGTGTTGCGAAGCACAATCATAGCAGTAGATAGTTCGTTAATAAGTGGGGTTTCCTATGTTGTCTACCTATATGGTTCAGCCAAGGAGCTTCTTCCTGCAGAAATCAGGGATGCAGTAAATGCATATGAATCTAAAGCTTCTCAAATATTGAGGCCGATTGGCTCTGCATCTCAAGAGATATTTACAACAATTTATTCATTGGAGAAGAGTCTAGGCTTGAGTACAGATGATCCAATTGTTCCATTTGTTGTTTTTGTGGGCTCTTCAGCCACAATATGGGCTGTCTATCTGTGGTGGACATATGGAGGTTACTCTGGAGATTTATCTCCTAAATCAGCTCTGGATCTCTTGTCTGGGAATAAAAATGCTGCACTTATAGATATCCGAAATGAGGATCTGAGAGAAAAAGATGGTATTCCCGATCTTCGGCGGGCTGCACGGTTTCGCTATGCGAGTGTAACTCCGCTAGAGTTTCAGGTTGATGGTTCTATTAGGAAGTTGTTCAAGAGTGAACGAGACCTTAATGACTCCATGATCGCTGTTGTCATTCGAAATTTGAAGATTGTTAAGGACAGTTCCAAGGTTATAGTCATGGATGCTGATGGTGGTCGTTCTAAAGGCATTGCAAAATCCTTGAGGAAAATTGGGGTCAAGACTCCGTACTTGGTTCAAGGTGGCTTTGATTCTTGGGTGAAACATGGCCTCCGCGTCAAGGAACTCAAACCTGAGACAACACTTACCTTACTCAATGAGGAAGCTGAGGCAATTCTAGAGGATCTTAGCCCTTCTCCTTTGCAACTTTTAGGCTATGCTGTGGCTGTTATTGCAGGGTCGTACGCATTATTAGAGTGGGAGAAGACATTACAATTAATTGGTGTTTTTGGCCTCAGCCTGACAATCTATCAGAGGGTGACCTCATATGAGAATTCTGAAGATCTTAAGCAAGATGTCAGGTTGTTGCTTACACCTGTGAGACTGGGAGCTCAAGCGGTTTCATGGATTTCTGGAAAAGTAGAAACGAACCGCATAGGTCTGCCTACTTCGCCTTCATCATTAGATGTTCAGAACCGAGTTTTGCAGGCGGCTGCAAAGCATGAATCTCAACCGTCGGATGCTGAAAGAATCCAAGATTCACCTGTTCCTGAACCATCACTTCCTCTCAATGAGAATGCATGA 1968 0.4233 MLPVCSATPSYSLSSQIPLYGGSVYPLQKDFEGRCIMDDVHLGLQNGTHSLRNPFIAQATKSVYSSVASSAEQSVYVDFPGRFSSPNEPGHLEGKFTNTWNCSPVTTSGHHSFTKGELIYVENYDSSSVPERLMDLTEQSTEGSEALLSTDIVSEKLIPTPESIIVDNESLGTTKESIGDTLSGISKSFNASISEGENVLQSSLDTATSLMRSVIENVTKSVDDAFGEALSSVNQSGELANKKLTSFSSDLSGITSKVPAFAIDVLRSTIIAVDSSLISGVSYVVYLYGSAKELLPAEIRDAVNAYESKASQILRPIGSASQEIFTTIYSLEKSLGLSTDDPIVPFVVFVGSSATIWAVYLWWTYGGYSGDLSPKSALDLLSGNKNAALIDIRNEDLREKDGIPDLRRAARFRYASVTPLEFQVDGSIRKLFKSERDLNDSMIAVVIRNLKIVKDSSKVIVMDADGGRSKGIAKSLRKIGVKTPYLVQGGFDSWVKHGLRVKELKPETTLTLLNEEAEAILEDLSPSPLQLLGYAVAVIAGSYALLEWEKTLQLIGVFGLSLTIYQRVTSYENSEDLKQDVRLLLTPVRLGAQAVSWISGKVETNRIGLPTSPSSLDVQNRVLQAAAKHESQPSDAERIQDSPVPEPSLPLNENA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0072 655 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 647 IPR044690 GO:0009704|GO:0071277|GO:0090333
Lele24g0072 655 ProSiteProfiles Rhodanese domain profile. 383 503 IPR001763 -
Lele24g0072 655 Pfam Rhodanese-like domain 374 496 IPR001763 -
Lele24g0072 655 SMART rhod_4 373 500 IPR001763 -
Lele24g0072 655 MobiDBLite consensus disorder prediction 624 655 - -
Lele24g0072 655 Gene3D - 368 510 IPR036873 -
Lele24g0072 655 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 365 502 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0072 Lele-ChrLele24 476615 481806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0072 333 464 Sulfurtransferasese or Rhodanese AT5G23060 32.168 3.94e-12 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0077 21 505195 510832 Lele24g0072 24 476615 481806 hybridization
Lele22g0076 22 458660 463612 Lele24g0072 24 476615 481806 hybridization