Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0071 ATGTGGAGGAGAGCTGTGTCAACCTTGGTGGTGGTTGTGGAACAGACCAGTGATAAAATTCCTGACCAGTTGATATTTAAGGTTTCAAGAAGTGGCCTGCTTTTGCGATGATCCCTTTCATTTACTCCAAACAAATGCAGGTTATATTCAAGTGAACTCAGTTGGAGCTTTTTGAGATACAATTTTGCTGGGTTGATTTTCTCTTGTGTAAATGAAGGTAAAGCTATCACACAAGGTCAAGTGAAACCAGATGTTGCAGCAATGAGTTACATCATGTTGCATGTGAGGAAATTGGCTGTTACACGTTACTTAGGTAAATGGGAAATGGAAATGTTGATTTTGACAGATCACAGTCACTCTAATAATAAGAGGAAACGGAAAGCAAGATTGAGACGTACACGAACAGAGATGCGCTGCTATGTTGTGACTATTCCCGGAAGCGATTATCGCTTCTTCTCCTCAACACCCTTATCTGTCCCCGCCACCAACACTTTCAGTCACAAATCTCTCCATTTCCCCTCTCGAACCGGCGGTTTCGTCTCTCTCAGAGTTAAAGCCGCCGTCAACGACGGCTATGTGGCCGAGGCCTCCAAGTTGAGCTTCTACGAGCTTCTGGGTATACCCGAATCTGGGTCCTTGCTCGAGATCAAGCAGGCTTACAAGCAGCTCGCGCGCAAGTACCACCCTGATGTGTCGCCGCCAGATCGGGTGAAGGAGTATACGAAGAGGTTCATTCAGGTGCAGGAGGCCTATGAGACCTTGTCTGATCCTCGAAGGAGGGCTATGTATGATAGAGACATGGCCAGAGGGATTCACTTCGCCTTCTCCGCGCGCCGGTGCTACTACGACGATGAGGTGATTGAACAAAAAAGTGAGTGGAAGGCTCGTTGGCAAAATCAGCTATCAGAGCTGAAGAGAAGAAGCAAGGTCAAGGACAATGGAGAAAATTTATCATGGGCAGCCCAAATGCGTCGTCGAAGAGCAGAATCATGTAACGACTCGTAA 1005 0.4697 MWRRAVSTLVVVVEQTSDKIPDQLIFKVSRSGLLLRXSLSFTPNKCRLYSSELSWSFLRYNFAGLIFSCVNEGKAITQGQVKPDVAAMSYIMLHVRKLAVTRYLGKWEMEMLILTDHSHSNNKRKRKARLRRTRTEMRCYVVTIPGSDYRFFSSTPLSVPATNTFSHKSLHFPSRTGGFVSLRVKAAVNDGYVAEASKLSFYELLGIPESGSLLEIKQAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPRRRAMYDRDMARGIHFAFSARRCYYDDEVIEQKSEWKARWQNQLSELKRRSKVKDNGENLSWAAQMRRRRAESCNDS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0071 334 SMART dnaj_3 199 259 IPR001623 -
Lele24g0071 334 PRINTS DnaJ domain signature 202 220 IPR001623 -
Lele24g0071 334 PRINTS DnaJ domain signature 239 259 IPR001623 -
Lele24g0071 334 PRINTS DnaJ domain signature 220 235 IPR001623 -
Lele24g0071 334 ProSiteProfiles dnaJ domain profile. 200 267 IPR001623 -
Lele24g0071 334 CDD DnaJ 201 256 IPR001623 -
Lele24g0071 334 ProSitePatterns Nt-dnaJ domain signature. 244 263 IPR018253 -
Lele24g0071 334 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 194 330 - -
Lele24g0071 334 SUPERFAMILY Chaperone J-domain 197 272 IPR036869 -
Lele24g0071 334 Gene3D DnaJ domain 189 290 IPR036869 -
Lele24g0071 334 FunFam Chaperone protein dnaJ 20, chloroplastic 186 295 - -
Lele24g0071 334 Pfam DnaJ domain 201 264 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0071 Lele-ChrLele24 468383 474718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0071 196 264 C2H2 Transcription Factor Family AT1G74250 40.278 4.23e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0071 24 468383 474718 Lele24g0071 24 468383 474718 ECH
Lele21g0075 21 496615 501611 Lele24g0071 24 468383 474718 hybridization
Lele22g0075 22 452904 456584 Lele24g0071 24 468383 474718 hybridization