Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0038 ATGCAGCTCCGCGCGCACACATCAGAGAGCAGTATGGGGGCGGTAGTAGAAACTGGAGAGTTTGATGAAGAAATGTACGTTTCTTCCTCATCTAAAGAAGAAGCAGAAGCAGAGAAGAACATTTACAGATACATATTCGGCTTCGTTGAGATGGCCGTCGTAAAATGCGCCATCGAGCTCAACGTACCAGAAGCCATTGAAAGCCACCACATTCCCATCACGCTTTCCCAACTCTCGTCAACCCTAAACTGCAACCCCTCCATGCTGTACCGCATCATGCGCTTCCTCACTCGCCGGAACATCTTCAGACAAGTCTCTACCACCCACGAAGGCGGCCGGCCTGAGCCTGCTTACGTGCACACCGCTCTTTCCCGGCTTCTGATAAAGAACAGCGAGGCCAGCATGGCCGCTTTAGTTATGCTGGAGTGCAGCCCCGTGATGCTGGCGCCGTGGCAGAACCTAAGTGGGAGGGTTCAGGCGAACGGGACGTCGTCGTTTGAGAAGGCTCACGGGAAGGATGTGTGGGGGTACGCGGAGGCGAACGCGGAGCACGGCGAGCTGATAAACGAGGCGATGGCGTGCGGTGCCCGGAGAGGGGTGAGGGAGATAGTGGAGCACTGCCCGGAGGCGTTCGAGGGGGTGAGGTCGGTGGTGGACGTGGGCGGAGGGAACGGAACCGCCATGAGGGTGCTGGTGAGGGCATGCCCCTGGCTGCGATGCATAAACTTCGATCTTCCGCATGTAGTGTCGGGGGCTGCCAAGTGCGAGGGCGTGGAACACGTGGGAGGAGACATGTTCGTGAGTGTTCCGAAAGCAGACGCTGCATTTCTCATGTGGGTGCTGCATGACTGGGGAGACGAGGAATGCATAGAGATACTGAAGAAGTGCAAGGAGGCTGTAGGAGAGAAGGGAAGGGTGATGATCGCGGAGGCGGTGATAGAGGAAGGAGGAGGAGAGAAGAAGAAGGAAGAGAGGTTGGAGGAGGTGGGGCTGATGCTGGACATGGTGATGATGGCTCACACCAATATCGGAAAAGAGAGGACAGTAAGAGAGTGGGAGCATGTCATCAAAGAGGCAGGATTTACCGCAGTCTCTGTCTGCCACGTCCCTTCTTCTGTCAAATCCCTCATTTTGGCCTTCCCTTGA 1146 0.562 MQLRAHTSESSMGAVVETGEFDEEMYVSSSSKEEAEAEKNIYRYIFGFVEMAVVKCAIELNVPEAIESHHIPITLSQLSSTLNCNPSMLYRIMRFLTRRNIFRQVSTTHEGGRPEPAYVHTALSRLLIKNSEASMAALVMLECSPVMLAPWQNLSGRVQANGTSSFEKAHGKDVWGYAEANAEHGELINEAMACGARRGVREIVEHCPEAFEGVRSVVDVGGGNGTAMRVLVRACPWLRCINFDLPHVVSGAAKCEGVEHVGGDMFVSVPKADAAFLMWVLHDWGDEECIEILKKCKEAVGEKGRVMIAEAVIEEGGGEKKKEERLEEVGLMLDMVMMAHTNIGKERTVREWEHVIKEAGFTAVSVCHVPSSVKSLILAFP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0038 381 PANTHER O-METHYLTRANSFERASE 51 361 IPR016461 GO:0008168
Lele24g0038 381 Pfam Dimerisation domain 53 97 IPR012967 GO:0046983
Lele24g0038 381 CDD AdoMet_MTases 217 308 - -
Lele24g0038 381 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 42 381 IPR016461 GO:0008168
Lele24g0038 381 Pfam O-methyltransferase domain 151 361 IPR001077 GO:0008171
Lele24g0038 381 Gene3D - 27 127 IPR036388 -
Lele24g0038 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 377 IPR029063 -
Lele24g0038 381 PIRSF O-mtase 20 381 IPR016461 GO:0008168
Lele24g0038 381 SUPERFAMILY "Winged helix" DNA-binding domain 32 130 IPR036390 -
Lele24g0038 381 FunFam O-methyltransferase family protein 129 380 - -
Lele24g0038 381 Gene3D Vaccinia Virus protein VP39 128 377 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0038 Lele-ChrLele24 287955 289187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0038 54 366 Monolignol Biosynthesis Gene Families AT5G54160 35.220 1.08e-62 203