Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0031 ATGAGGGGAAGGAGCTATAGTCAGTCGCCGCCCAGGGGTTATGGCAGAAGAGGAAGAAGTCCTAGCCCCAGAGGTCGTTATGGTGGCCGTGGCAGAGATCTCCCTACCAGTCTTCTCGTTCGCAACCTTCGCCATGACTGCAGGGCTGAGGATCTTCGTAGGCTTTTTGGGCAATTTGGTGCTCTTAAGGACATTTACCTCCCGAAAGATTATTATACCGGAGAACCCCGAGGCTTTGGTTTTGTCCAATACGTAGATCCTGCTGATGCTGCAGATGCAAAATATCATGTGGATGGTCAAATTCTTCTTGGTCGAGAGTTGACAGTTGTTTTTGCTGAGGAGAACAGAAAGAAGCCTACTGAGATGAGATCAAGAGAAAGAAGGGGCCAATTTTCTGATCGAAGAAGGTCTCCACCTCGTTATTCTCACTCTCCTCGCCACTCTAGGTCACTGTCACGTCGTAGATCTCAGTCTCGAAGCCGTGGTTATGATTCTCCCCCTCCTAAACGAAGGGAGTATTCAAGATCCGTGTCGCCTGAAGATAGAAGAGACAGTCGAGAAAGAGAGAGAGAGAGATCATACTCACGGCAGAGTAGGGAGAGGTCATACTCACGCTCTCCGCCGCCCTATAATGGTGGTTCAAGGAGTCGAAGTCAGAGTCCAGCTAAGGGCCTAAGCCGGCGCCGCAGTCAGAGTCCGAATCGTGATGATTATCCAAGGGAATCTCGTGGTAGATCCCCCAGTCAATGA 750 0.504 MRGRSYSQSPPRGYGRRGRSPSPRGRYGGRGRDLPTSLLVRNLRHDCRAEDLRRLFGQFGALKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHVDGQILLGRELTVVFAEENRKKPTEMRSRERRGQFSDRRRSPPRYSHSPRHSRSLSRRRSQSRSRGYDSPPPKRREYSRSVSPEDRRDSRERERERSYSRQSRERSYSRSPPPYNGGSRSRSQSPAKGLSRRRSQSPNRDDYPRESRGRSPSQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0031 249 MobiDBLite consensus disorder prediction 200 228 - -
Lele24g0031 249 Gene3D - 30 148 IPR012677 -
Lele24g0031 249 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 35 235 - -
Lele24g0031 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Lele24g0031 249 MobiDBLite consensus disorder prediction 140 156 - -
Lele24g0031 249 MobiDBLite consensus disorder prediction 116 139 - -
Lele24g0031 249 MobiDBLite consensus disorder prediction 1 33 - -
Lele24g0031 249 MobiDBLite consensus disorder prediction 229 243 - -
Lele24g0031 249 SUPERFAMILY RNA-binding domain, RBD 36 141 IPR035979 GO:0003676
Lele24g0031 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Lele24g0031 249 MobiDBLite consensus disorder prediction 157 199 - -
Lele24g0031 249 SMART rrm1_1 37 110 IPR000504 GO:0003723
Lele24g0031 249 MobiDBLite consensus disorder prediction 116 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0031 Lele-ChrLele24 252959 256581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0031 3 99 Eukaryotic Initiation Factors Gene Family AT3G11400 36.792 4.98e-09 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0035 21 283527 286737 Lele24g0031 24 252959 256581 hybridization
Lele22g0033 22 230513 236588 Lele24g0031 24 252959 256581 hybridization