Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0024 ATGAGAAAGCCCTCATCGGCGTCGTCCCGGTCAACTGAAGCGGCGCCTGCTAAGACCACTCCCTGCTGCATCAAAGTAGGGATCAAGAGAGGCCCTTGGACTCCTGAGGAAGACGAGCTCCTCTCCAAGTGGTCTCTGATAGCGGGCAGGATCCCTGGGAGAACCGACAACGAGATCAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATCAGCCAAGGCATTGATCCCCGCACCCACAAGCCCCTCAACCCTAATACTCAGCCATCAACCAGTGCTGCTCCATGTCCGCATCACCATCTTCATGATCGTAATCATTCATTCTCCAACCCCGCTGCTACCACTAAACCTAATCCTAATAATAAACCTCCAATTACTGAGCAGGACCCCAATCCCTACTGTCACGCCACTCCTCCCCATCACTTGGATCCATATGATCAAGCATTGGCCCTCGGGGATCTGCCCGAAATCCCCGTGGCCAATACCCCCAGTAATGACGACGACGAAGATATCAACTACAGTACCGACGATGTCTTCTCCTCTTTCATCAACTCACTGATCAACGACGATGCCTTTTCTGCTCAGCAGCAGCACCCTCCACCGCCTCCTTTTAACGGCATTGATGGTGTGGCCTGGGAATCTTCGCTGGTCTCCTCTCACGACGACCCCAACAATAATATGCCTAATGCAGATGGTGTCCGCTAG 708 0.5282 MRKPSSASSRSTEAAPAKTTPCCIKVGIKRGPWTPEEDELLSKWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPNTQPSTSAAPCPHHHLHDRNHSFSNPAATTKPNPNNKPPITEQDPNPYCHATPPHHLDPYDQALALGDLPEIPVANTPSNDDDEDINYSTDDVFSSFINSLINDDAFSAQQQHPPPPPFNGIDGVAWESSLVSSHDDPNNNMPNADGVR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0024 235 Pfam Myb-like DNA-binding domain 30 67 IPR001005 -
Lele24g0024 235 SMART sant 29 69 IPR001005 -
Lele24g0024 235 ProSiteProfiles Myb-like domain profile. 25 67 IPR001005 -
Lele24g0024 235 SUPERFAMILY Homeodomain-like 24 77 IPR009057 -
Lele24g0024 235 Gene3D - 32 94 - -
Lele24g0024 235 MobiDBLite consensus disorder prediction 1 20 - -
Lele24g0024 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 71 IPR017930 -
Lele24g0024 235 MobiDBLite consensus disorder prediction 80 95 - -
Lele24g0024 235 PANTHER F14D16.11-RELATED 42 202 - -
Lele24g0024 235 MobiDBLite consensus disorder prediction 191 235 - -
Lele24g0024 235 MobiDBLite consensus disorder prediction 1 16 - -
Lele24g0024 235 MobiDBLite consensus disorder prediction 76 142 - -
Lele24g0024 235 CDD SANT 32 67 IPR001005 -
Lele24g0024 235 MobiDBLite consensus disorder prediction 108 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0024 Lele-ChrLele24 200097 201127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0024 28 190 MYB Transcription Factor Family AT3G13540 36.994 9.22e-26 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele24g0024 Myb_DNA-binding 1.1e-08 CL0123