Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0019 ATGAAAAGACCTGACCGGTCTCACATAAGGATTGTCATCAGTGCCTGCCTCCAAAAGGAATGGGAGACAAACTTGGAAGAATTCAGGGCGAGAAGGAAATGCTGGGATGAAAGCTTGGTTTTGTGGAAAATGGCAACTTTAATTGAGCCGCCGAATAAAATTGGGCCGAAGGGGAAGCATTATTACTCCATATGGCAAACAGTGTTCGAGATTGATACAAAGTACGTTCCAATAAAACCCATCGGACGAGGAGCATATGGGGTAGTATGCTCTTCCATCAACAGGGAAACGAACGAGAAAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAATCGCATTGATGCGTTGAGAACTCTGAGGGAATTGAAGCTGCTTAGACATATTAGGCACGAGAATGTGATTGCTTTGAAGGATGTGATGTTGCCTGCCCAGAGAACAAGTTTCAAGGATGTGTACTTGGTTTATGAACTCATGGATACTGATCTTCATCAAATAATTAAATCTTCGCAGCCCCTCTCCAATGATCATTGCAAATATTTTATATTTCAGTTGCTTCGAGGTCTCAAATATCTTCACTCCGCAAATATCCTTCACCGGGACTTGAAGCCTGGAAATCTGCTCATCAACGCCAACTGTGATCTGAAGATATGTGACTTTGGGCTTGCACGAACAAATGGAGGAGACGGGCAGTTCATGACGGAGTATGTTGTGACCCGCTGGTATCGTGCTCCAGAGCTGCTCTTATGCTGTGAAAATTATGGAACCTCAATTGATGTGTGGTCCGTAGGATGCATTTTTGCGGAGGTTCTTGGTAGAAAGCCAATCTTTCCTGGAACTGAATGCCTGAACCAGTTGAAACTTATCATACGTGTGCTGGGAAGCCAGGATGAGTCGGACCTTGCGTTTATTGATAATCCAAAGGCCAGGAGGTATATCAAATCACTGCCTTACACAAGAGGCGTGCACTTGTCTCAGCTGTACCCACAAGCAGATCCATTAGCCATAGATTTATTGCAGAAAATGCTGGTGTTTGATCCCACCAAGAGAATTACTATCATGGAAGCACTAAAACACCCATATATGGCCGGCCTTTATGATCCAAGATCTAATCCTCCCTCCCAGGTTCCCATCAATCTCGACCTAGATGAAAACTGGAGGGAACCCACCATTAGGGAAATTATGTGGAACGAGATGCTTCACTATCATCCCGAAGCTTCTGCCCATTCATAG 1233 0.4404 MKRPDRSHIRIVISACLQKEWETNLEEFRARRKCWDESLVLWKMATLIEPPNKIGPKGKHYYSIWQTVFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENRIDALRTLRELKLLRHIRHENVIALKDVMLPAQRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFIFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGGDGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEVLGRKPIFPGTECLNQLKLIIRVLGSQDESDLAFIDNPKARRYIKSLPYTRGVHLSQLYPQADPLAIDLLQKMLVFDPTKRITIMEALKHPYMAGLYDPRSNPPSQVPINLDLDENWREPTIREIMWNEMLHYHPEASAHS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0019 410 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 74 369 - -
Lele24g0019 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lele24g0019 410 Gene3D Phosphorylase Kinase; domain 1 62 388 - -
Lele24g0019 410 ProSitePatterns MAP kinase signature. 110 213 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele24g0019 410 Pfam Protein kinase domain 76 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0019 410 SMART serkin_6 75 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0019 410 Gene3D Transferase(Phosphotransferase) domain 1 159 383 - -
Lele24g0019 410 ProSitePatterns Protein kinases ATP-binding region signature. 81 105 IPR017441 GO:0005524
Lele24g0019 410 CDD STKc_TEY_MAPK 69 404 - -
Lele24g0019 410 FunFam Mitogen-activated protein kinase 61 169 - -
Lele24g0019 410 FunFam Mitogen-activated protein kinase 159 388 - -
Lele24g0019 410 SUPERFAMILY Protein kinase-like (PK-like) 67 368 IPR011009 -
Lele24g0019 410 ProSiteProfiles Protein kinase domain profile. 75 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0019 Lele-ChrLele24 170778 173911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0019 44 406 MAP Kinase Gene Family AT2G18170 85.675 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele24g0019 Pkinase 3.3e-70 CL0016