Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0006 ATGGGCAACTGCTGGTTTTCTCGGGAATCTTCGGTTTACAGAGTGTCGTCTAATGCTAAGTCAGACTTACCCAAGGACCAAATTCATGCCATCAAACCACGGAATGATGATAGTAAGTTACCATCCAACCCCGAAGAAGTAGAAGTCCTACGCCGTGATTCAGCTGCAAAACCTTTGACTGCCTTCACCTACGATGAACTAAAGGTGATCACTGGCAATTTTAGGCAAGATCATCTTTTGGGTGGAGGAGGATTTGGAAGTGTTTACAAGGGTTTTATTTCTGAGGATGTCAGAGAGGGTCTTCCTCCTCTTACTGTGGCCGTCAAGGTACATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCGGAAGTCATATTTCTCGGTCAGCTTTCTCATCCAAATTTGGTCCAATTGATCGGATACTGCTGCGAAGACGAACACAGGGTGCTCATATATGAGTATATGGCCCGAGGGAGTGTGGAAAATAATCTCTTTTCCAGAGTATTGCTTCCCCTGCCTTGGTCCATAAGAATGAAGATCGCATTTGGCGCTGCTAAGGGACTTGCATTTCTTCATGAAGCCGAGAAGCCTGTTATCTATCGTGACTTCAAGACATCAAATATATTATTGGACCTGGATTACAATGCAAAACTTTCTGACTTTGGCCTTGCTAAGGATGGACCTGTTGGCGACAAATCTCACGTCTCTACTCGCATAATGGGAACTTATGGATATGCTGCACCGGAATACATATTGACTGGTCATCTGACCCCTAGAAGTGATGTGTACAGTTTTGGCGTTGTCCTTCTTGAACTTCTGACCGGAAGAAAATCTCTAGATAAGTCACGGCCTGCTCGGGAGCAGAACCTTGCAGATTGGGCTCTTCCCCTGCTGAAGGAAAAGAAGAAATTGTTGAATATAATTGATCCGAGACTGGAAGGCGATTATCCTATAAAAGGACTTCACAAGGCTGCGATGCTAGCTTATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTTTGATGCGAGATATAGTAGATTCATTGGAGCCTTTGCAGCTTCACAATGAGGTTTCTATTGGAAAAGCATTGACCATCATCAGTGAGGTTCCTCAACCCGAATTAAAAAGGAAAGATGCAGAATAA 1155 0.445 MGNCWFSRESSVYRVSSNAKSDLPKDQIHAIKPRNDDSKLPSNPEEVEVLRRDSAAKPLTAFTYDELKVITGNFRQDHLLGGGGFGSVYKGFISEDVREGLPPLTVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVQLIGYCCEDEHRVLIYEYMARGSVENNLFSRVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILTGHLTPRSDVYSFGVVLLELLTGRKSLDKSRPAREQNLADWALPLLKEKKKLLNIIDPRLEGDYPIKGLHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQLHNEVSIGKALTIISEVPQPELKRKDAE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0006 384 SUPERFAMILY Protein kinase-like (PK-like) 48 352 IPR011009 -
Lele24g0006 384 Gene3D Transferase(Phosphotransferase) domain 1 158 368 - -
Lele24g0006 384 ProSitePatterns Protein kinases ATP-binding region signature. 80 109 IPR017441 GO:0005524
Lele24g0006 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Lele24g0006 384 FunFam Serine/threonine-protein kinase BIK1 41 157 - -
Lele24g0006 384 Pfam Protein tyrosine and serine/threonine kinase 77 352 IPR001245 GO:0004672|GO:0006468
Lele24g0006 384 FunFam Probable serine/threonine-protein kinase PBL8 158 370 - -
Lele24g0006 384 PANTHER OS01G0588500 PROTEIN-RELATED 40 356 - -
Lele24g0006 384 ProSiteProfiles Protein kinase domain profile. 74 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0006 384 Gene3D Phosphorylase Kinase; domain 1 13 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0006 Lele-ChrLele24 63366 67144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0006 3 352 Glycoside Hydrolase AT3G07070 47.383 3.31e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele24g0006 PK_Tyr_Ser-Thr 4.7e-44 CL0016