Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g2048 ATGAAATCGGGTGGCGGCCTCTGTCTGATCCTGCTTATTATAATGGGCAACTGCTGGTTTTCTCGGGAATCCTCCGTATACAGAGTGTCATCCAATGCTAAGTCAGACTCCCCCAAGGACCAAATTCATGCCATCAAACCACGTAATGATGATAGTAAGTTACCATGCAACCCCGAAGAAGTAGAAGTCCTACGCCGTGATTCAGCTGCAAAGCCTTTGATTGCCTTCACCTACGATGAACTAAAGGTAATCACTGGAAATTTTAGGCCAGATCGTCTTTTGGGTGGAGGAGGATTTGGGAGTGTTTACAAGGGTTTTATTTCTGAGGACGTCAGAGAGGGCCTTCCTCCTCTTACCGTGGCCGTCAAGGTACATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCGGAAGTCATATTTCTCGGCCAGCTTTCTCATCCAAATTTGGTCCAATTAATCGGATACTGCTGCGAAGACGAACACAGGGTGCTCATATACGAGTATATGGCCCGAGGAAGTGTGGAAAATAATCTCTTTTCCAGAGTATTGCTTCCCCTGCCATGGTCCATAAGAATGAAGATCGCATTCGGCGCTGCTAAGGGACTTGCATTTCTTCATGAAGCCGAGAAGCCTGTTATCTATCGTGACTTTAAGACATCAAATATATTATTGGACCTGGACTACAACGCAAAACTTTCTGACTTTGGCCTTGCTAAGGATGGACCTGTTGGCGACAAATCTCACGTCTCTACTCGCATAATGGGTACTTATGGATATGCTGCCCCGGAATACATATTGACTGGCCATCTGACCCCTAGAAGTGATGTGTACAGTTTTGGCGTTGTTCTTCTTGAACTTCTGACGGGAAGAAAATCTCTAGATAATTTACGGCCTGCTCGGGAGCAGAACCTTGCAGATTGGGCTCTTCCCTTGCTGAAGGAAAAGAAGAAATTGTTGAGTATAATTGATCCAAGACTGGAAGGCGATTATCCTATAAAAGGAGTCCACAAGGCCGCGATGCTAGCTTATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTTTAATGCGAGATATAGTAGATTCGTTGGAGCCTTTGCAGCTTCAAAATGAGGTTTCTATTGGAAAAACATTGACCATCATCAGTGAGGTGCCTCAACCCGAACCAAAAAGGAAAGATGCAGAATAA 1197 0.4536 MKSGGGLCLILLIIMGNCWFSRESSVYRVSSNAKSDSPKDQIHAIKPRNDDSKLPCNPEEVEVLRRDSAAKPLIAFTYDELKVITGNFRPDRLLGGGGFGSVYKGFISEDVREGLPPLTVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVQLIGYCCEDEHRVLIYEYMARGSVENNLFSRVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILTGHLTPRSDVYSFGVVLLELLTGRKSLDNLRPAREQNLADWALPLLKEKKKLLSIIDPRLEGDYPIKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQLQNEVSIGKTLTIISEVPQPEPKRKDAE 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g2048 398 SUPERFAMILY Protein kinase-like (PK-like) 65 366 IPR011009 -
Lele23g2048 398 ProSitePatterns Protein kinases ATP-binding region signature. 94 123 IPR017441 GO:0005524
Lele23g2048 398 ProSiteProfiles Protein kinase domain profile. 88 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g2048 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lele23g2048 398 Gene3D Phosphorylase Kinase; domain 1 52 171 - -
Lele23g2048 398 MobiDBLite consensus disorder prediction 31 53 - -
Lele23g2048 398 FunFam Probable serine/threonine-protein kinase PBL8 172 385 - -
Lele23g2048 398 FunFam Serine/threonine-protein kinase BIK1 55 171 - -
Lele23g2048 398 Gene3D Transferase(Phosphotransferase) domain 1 172 383 - -
Lele23g2048 398 PANTHER OS01G0588500 PROTEIN-RELATED 42 370 - -
Lele23g2048 398 MobiDBLite consensus disorder prediction 39 53 - -
Lele23g2048 398 Pfam Protein tyrosine and serine/threonine kinase 92 366 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g2048 Lele-ChrLele23 23114901 23119416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g2048 17 366 Glycoside Hydrolase AT3G07070 46.832 1.55e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele23g2048 PK_Tyr_Ser-Thr 7e-44 CL0016