Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g2040 ATGAATGGAATTGTGGAGAATTTATTGATAGAAAAGTTGATTTTAACCCAGAGAGAGGCAATCGCACAGGTCCTGCCTCATTGGCGAACCAGGGAGACGATGGGGGCTTACAAGTACGTATCGGAGCTATGGCGGAAGAAGCAGTCCGATGTGATGAAATTCTTGCAGAGAGTGAGATGCTGGGAGTATCGTCAGCAGCCGTCGATCGTGCGTGTGACGAGGCCAACCCGACCCGATAAGGCTCGTCGCTTAGGGTACAAGGCTAAGCAGGGCTACGTGGTTTACCGTGTTCGTGTGAGGAGAGGGGGTCGCAAGAGGCCTGTTCCCAAGGGTATTGTCTATGGCAAACCTACCAATCAAGGTGTTACCCAACTCAAATTCCAACGCAGCAAGAGGTCTGTTGCTGAGGAGCGAGCTGGCCGCAAGTTGGGTGGCCTCAGGGTTCTCAATTCTTACTGGGTCAATGAGGATTCAACCTACAAGTACTACGAGATCATCCTTGTGGATGTTGCCCACAACGCCATTCGCAATGACCCAAGAATCAATTGGCTCTGTAACCCCGTCCACAAGCACAGGGAGCTCAGGGGCCTCACTTCTGCCGGCAAGAAATACAGGGGCTTGCGTGGCAGGGGACATCTTCATCACAAAGCTCGTCCGTCTCGCAGGGCCACCTGGAAGAGGAACAATACCCTCTCCCTTCGTCGCTACCGCTGA 714 0.5308 MNGIVENLLIEKLILTQREAIAQVLPHWRTRETMGAYKYVSELWRKKQSDVMKFLQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYYEIILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLHHKARPSRRATWKRNNTLSLRRYR 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g2040 237 Pfam Ribosomal L15 35 223 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lele23g2040 237 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 34 228 IPR012678 GO:0003735|GO:0005840|GO:0006412
Lele23g2040 237 ProSitePatterns Ribosomal protein L15e signature. 79 102 IPR020925 GO:0003735|GO:0005840|GO:0006412
Lele23g2040 237 Gene3D Ribosomal protein l15e 34 237 IPR024794 GO:0003735|GO:0005840
Lele23g2040 237 PANTHER RIBOSOMAL PROTEIN L15 34 237 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lele23g2040 237 FunFam Ribosomal protein L15 34 237 - -
Lele23g2040 237 SMART Ribosomal_L15e_2 35 226 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g2040 Lele-ChrLele23 23041147 23045057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g2040 34 237 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.667 3.23e-127 356