Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g2031 ATGAGAAAGCCCTCATCGGGGTCGTCCCGGTCAGCTGAAGCCCCGCCTCCTAAGACCACTCCTTGCTGCAGCAAAGTAGGGCTCAAGAGAGGCCCCTGGACTCCCGAGGAAGACGAGCTCCTCTCCAAGTGGTCTCTGATAGCTGGCAGGATCCCTGGGAGAACCGATAATGAGATCAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATCAGCCAAGGCATCGATCCCCGCACCCACAAGCCCCTCAACCCTAATACCCAGCCATCAACCACTGCCGCTCCATGTTCTCATCATCATTATTCATCCTCCAACCCCTCTGCTACCACTAAACCTAATCGTAATGATAAACCTCCAATTACTCAGCAGGACCCTAATCCCTACTGCGATGACGCCACTCCTTCCCATCACTTGGATCCTTATGATCAGGCATTGGCCCTCGGGGATCTGCCAGCAATCCCCTTGGCCAATACCCCCAGCAATGACGACGACGAAGATATCAACTACTGTACCGACGATGTCTTCTCCTCTTTCATCAACTCACTGATCAACGACGATGCCTTTTCTGCTCAACACCAGCACCAGCACCCTCCACCACCTCCTTATAATGGTGTGCCCTGGGAATCTTCACTGGTCTCCGCCCACGACGATCCCAACAATAATATGTCTGATGCAGATGGTGTCCACTAG 693 0.5296 MRKPSSGSSRSAEAPPPKTTPCCSKVGLKRGPWTPEEDELLSKWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPNTQPSTTAAPCSHHHYSSSNPSATTKPNRNDKPPITQQDPNPYCDDATPSHHLDPYDQALALGDLPAIPLANTPSNDDDEDINYCTDDVFSSFINSLINDDAFSAQHQHQHPPPPPYNGVPWESSLVSAHDDPNNNMSDADGVH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g2031 230 SUPERFAMILY Homeodomain-like 24 77 IPR009057 -
Lele23g2031 230 MobiDBLite consensus disorder prediction 1 35 - -
Lele23g2031 230 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 43 123 - -
Lele23g2031 230 SMART sant 29 69 IPR001005 -
Lele23g2031 230 MobiDBLite consensus disorder prediction 80 130 - -
Lele23g2031 230 MobiDBLite consensus disorder prediction 76 141 - -
Lele23g2031 230 ProSiteProfiles Myb-like domain profile. 25 67 IPR001005 -
Lele23g2031 230 MobiDBLite consensus disorder prediction 1 15 - -
Lele23g2031 230 Gene3D - 32 125 - -
Lele23g2031 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 71 IPR017930 -
Lele23g2031 230 MobiDBLite consensus disorder prediction 191 230 - -
Lele23g2031 230 CDD SANT 32 67 IPR001005 -
Lele23g2031 230 Pfam Myb-like DNA-binding domain 30 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g2031 Lele-ChrLele23 22962339 22963360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g2031 28 186 MYB Transcription Factor Family AT3G13540 41.071 2.84e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele23g2031 Myb_DNA-binding 1.1e-08 CL0123