Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g2018 ATGGACTTCCAAGTGGTTGTTCTCGCCGGTGGTACCTCCAACAAACTCCTTCCTCTCATCTCCAAGGAGGTTCCGAAACCTTTACTTCCCGTGGCGAATAGGCCAGTTCTATCTTACGTTCTTGAGTTGTTGGAGCTCAGTAACCTTAAAACGCTCATAGTGGTAGTTGAAGGCGAAGAAGAAGCTATTCATGTCGGCGGTTGGATATCAGGGGCTTATGTCGATCGTTTGAATGTTGAGGTTGCTGCAGTCCCTGAGGATGTGGGAACAGCTGGTGCAATTCGGGCTATTGCACACCACTTAACTGCTAAAGACATTTTGGTTGTCAGTGGTGATCTTGTTTCTGATGTACCTCCTGGTGCCATTGCTGCTGCTCATAGAAGACATGATGCAGCGGTTACTGCAATGCTTTGCCCTGCTCCTGTTAGTGGATCTTCAGAGTCAGGAACCTCTGGTGGGAAAGACAAAACCAAGAAAGTTGGTCGCCACGACTTAATTGGGCTGGATCCCACAACACAGTTTTTACTGTACATTGCAACTGGTGCTGAATTGGAAAAAGATGTTCGAATTCAGAAGAGCATACTTCGGGCAGTTGGTCAGATGGAGATAAGAGCTGATCTTATGGATGCCCATTTGTATGCATTCAAGAGATCCGTTCTACTTGAAGTTTTGGATCAAAAGGCCACATTTCATAGCTTAAAGCAGGATGTATTGCCTTACCTAGTCCGGAGCCAACTGAGATCAGAAGTTTTGTTCAATGGTACACCACAAACTGAAGAAAATGGATCTGAGAAGGTTATATCACAGAGCAATGAACAAATGTTATCTCAAATCCTTTCTAATGCGACTCATCCAACATTACATCAACAATATGCGCTGGGTCCTAATGGTTCTACTTCTGCTGGAAGAACTCATAAATGCTGTGTTTATATTGCTGAAAGCAGCAAGTATTGTGCACGCTTAAATTCTATTCAAGCATACAGTGACATAAATCGAGATGTGATAGGAGAAGCTAGTCATTTATCAGGGTATTCCTTCTCTGCTCACAACAATATCATCCATCCTTCTGCAGAACTTGGAGCAAAAACCACCGTAGGACCACATTGTATGCTGGGTGAAGGTTCACAGATGAGTGACAAATGCAGTGTTAAACGGTCTGTTATTGGTCGTCACTGCCGGATAGGTGCCAATGTCAAGATTGTTAATTCCATAGTCATGAATCATGTTACTATTGGAGATGGTTGCTCGATCCAAGGCTCTGTCATCTGCAGCAATGTGCAGCTCCAAGAGCGTGTTGGGCTAAAAGATTGTCAAATTGGAGCAGGTTTTGTTGTCACTGCGGGAAGTGAGTACAAAGGAGAAGTATTGGCTAGGAAATAA 1380 0.4399 MDFQVVVLAGGTSNKLLPLISKEVPKPLLPVANRPVLSYVLELLELSNLKTLIVVVEGEEEAIHVGGWISGAYVDRLNVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPPGAIAAAHRRHDAAVTAMLCPAPVSGSSESGTSGGKDKTKKVGRHDLIGLDPTTQFLLYIATGAELEKDVRIQKSILRAVGQMEIRADLMDAHLYAFKRSVLLEVLDQKATFHSLKQDVLPYLVRSQLRSEVLFNGTPQTEENGSEKVISQSNEQMLSQILSNATHPTLHQQYALGPNGSTSAGRTHKCCVYIAESSKYCARLNSIQAYSDINRDVIGEASHLSGYSFSAHNNIIHPSAELGAKTTVGPHCMLGEGSQMSDKCSVKRSVIGRHCRIGANVKIVNSIVMNHVTIGDGCSIQGSVICSNVQLQERVGLKDCQIGAGFVVTAGSEYKGEVLARK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g2018 459 Gene3D Hexapeptide repeat proteins 349 456 - -
Lele23g2018 459 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Lele23g2018 459 CDD LbH_eIF2B_gamma_C 370 450 - -
Lele23g2018 459 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 344 IPR029044 -
Lele23g2018 459 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 459 - -
Lele23g2018 459 Pfam Nucleotidyl transferase 6 149 IPR005835 GO:0009058|GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g2018 Lele-ChrLele23 22888665 22893638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g2018 3 450 Eukaryotic Initiation Factors Gene Family AT2G34970 22.921 9.11e-19 87.4