Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1977 ATGTTGCCTGTTTGCTCAGCCACCCCAAGCTATTCATTGTCTTCCCAGATTCCATTGTATGGGGGATCCGTGTATCCATTGCAGAAGGATTTTGAAGGGAGATGCATTATGGATGATGTACATCTGGGTTTGCAAAATGGAACCCACTCCCTGAGGAATCCATTTATTGCACAAGTTACAAAGTCCGTCTACTCTAGCGTTGCTAATAGCGCTGAACAATCGGTATATGTGGATTTCCCTGGCAGATTTTCCTCTCCAAATGAACCAGGACACCTTGAGTGCAAATTTACAAACACTTGGAATTGTTCCCTGGTGACAACAAGTGGACACCATTCACTGACTAGTGGAGAACTCATATATGTTGAAAATTATGATTCATCATCTGTCCCAGCGATATTGATGGACCTAACTGAACAGTCAACTGAAGGATCGGAAACTTTATTAAGTACCGACATTGTGTCAGAGAAGCTCATCCCTACGCCTGAATCGATTGTAGTGGACAATGAATCATTAGGCAGCACAAAAGCAAGTATTGGTGATAATTTTTCTGGGATTAGCAAGTCATTTAACGGACAAAATGCTTTACAAAGCTCACTTGATACGGCCACTTCTTTGGTGAGATCTGTAATTGAGAATGCTACTAAATCTGTAGACAATGCTTTCGGTGGAGCCCTTTCTTCTGTCAATCAAACAGGGGAATTAGCTAATAAGAAATTGACTAGCTTTTCGAGTGATCTAAGCGGAATCATGAGCAAAGTACCTGCTTTTGCTATTGATGTGTTGCGAAGCACGATCGTAGCAGTAGAGAGTTCGTTAATAAGTGGGGCTTCCTATGTTGTCTACCTATATGGTTCATCCAAGGAGCTTCTTCCTGTAGGAATCAGGGATGCAGTAAATGCATATGAATCTAAAGCTTCTCAAATATTGAGGCCAATTGGCTTTGCATCTCAAGAGATATTCACAACAATTTATTCATTGGAGAAGAGTCTTGGCTTGGATCCAGATGATCCAATTGTTGCATTTGTTGTTTTTGTGGGATCTTCAGCCACAATATGGACATTCTATCGGTTGTGGGCATATGGAGGTTACGCTGGAGATTTATCTCCTAAATCAGCTTTGGATCTCTTGTCTGGGAATAAAAATGCTGCACTTATAGATATCCGAAATGAGGATCTGCGAGAAAAAGATGGTATTCCCGATCTTCGGCGGGCTGCACGGTTTCGCTATGCAAGTGTAACTCCGCTAGAGGTTGATAGTTCTATTAGGAAGTTGTTCAAGAGTGAACGAGACCTTAACGACTCCATGATCGCTGTTGTCATTCGAAATTTGAAGATTGTTAAGGACATTTCCAAGGTTATAGTCATGGATGCTGATGGTGGTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGGGTCAAGACTCCATACTTGGTTCAAGGTGGTTTTCAGTCTTGGGTGAAACAAGGCCTCCGCGTCAAGGAGCTCAAACCTGAGACAACACTTACCTTACTCAATGAGGAAGCTGAAGCAATTCTAGAGGATCTTAGCCCTTCTCCTTTGCAACTTTTAGGATATGGTGTGGCTGTTATTGCAGGGTCGTACGCATTATTAGAGTGGGAGAAGATATTACAGTTAATTGGTGTTTTTGGCCTCAGCCTGACAATCTATAGGAGGGTGACCTCATATGAGGATTCTGAAGATCTTAAGCAAGATGTCAGGTTGTTGCTTACACCTGTGAGACTGGGAGCTGAAGCGGTTTCATGGATATCTGGAAAAGTAGAAAGGAACCGCATAGGGTTGCCTACTTCGCCTTCATCACTAGATGTTCAGAACCGAGTTTTGCAGGCGGCTGCAAAGCATGAATCTCAACCATCGGATGCTAAAAGTATCCAAGATTCACCTGTTCCTGAACCATCACTTCCTCTCAATGAGAATGCATGA 1947 0.4263 MLPVCSATPSYSLSSQIPLYGGSVYPLQKDFEGRCIMDDVHLGLQNGTHSLRNPFIAQVTKSVYSSVANSAEQSVYVDFPGRFSSPNEPGHLECKFTNTWNCSLVTTSGHHSLTSGELIYVENYDSSSVPAILMDLTEQSTEGSETLLSTDIVSEKLIPTPESIVVDNESLGSTKASIGDNFSGISKSFNGQNALQSSLDTATSLVRSVIENATKSVDNAFGGALSSVNQTGELANKKLTSFSSDLSGIMSKVPAFAIDVLRSTIVAVESSLISGASYVVYLYGSSKELLPVGIRDAVNAYESKASQILRPIGFASQEIFTTIYSLEKSLGLDPDDPIVAFVVFVGSSATIWTFYRLWAYGGYAGDLSPKSALDLLSGNKNAALIDIRNEDLREKDGIPDLRRAARFRYASVTPLEVDSSIRKLFKSERDLNDSMIAVVIRNLKIVKDISKVIVMDADGGRSKGIARSLRKIGVKTPYLVQGGFQSWVKQGLRVKELKPETTLTLLNEEAEAILEDLSPSPLQLLGYGVAVIAGSYALLEWEKILQLIGVFGLSLTIYRRVTSYEDSEDLKQDVRLLLTPVRLGAEAVSWISGKVERNRIGLPTSPSSLDVQNRVLQAAAKHESQPSDAKSIQDSPVPEPSLPLNENA 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1977 648 ProSiteProfiles Rhodanese domain profile. 378 496 IPR001763 -
Lele23g1977 648 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 640 IPR044690 GO:0009704|GO:0071277|GO:0090333
Lele23g1977 648 MobiDBLite consensus disorder prediction 617 648 - -
Lele23g1977 648 Pfam Rhodanese-like domain 369 489 IPR001763 -
Lele23g1977 648 SMART rhod_4 368 493 IPR001763 -
Lele23g1977 648 CDD RHOD 373 488 - -
Lele23g1977 648 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 349 496 IPR036873 -
Lele23g1977 648 Gene3D - 363 503 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1977 Lele-ChrLele23 22651501 22662432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1977 304 457 Sulfurtransferasese or Rhodanese AT5G23060 25.843 6.32e-11 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0077 21 505195 510832 Lele23g1977 23 22651501 22662432 hybridization
Lele22g0076 22 458660 463612 Lele23g1977 23 22651501 22662432 hybridization