Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1932 ATGGCTGCTCCTCTTGTGCTTTCTGCCCATTTCTCTTCTATACCCCATAAAACCCGTAACGGATCACTTTCTCTGTCCTCTTCTTCGGTCTCCACCGCCATTTTCATGAACCCCGTATCAAAACCAAATAAAAATGATATTTTTTTCTTAAAGAACCCTTCAAAAGAAGTGCTAATTTCTCGGAAATTCATTGCTTGTACTTCTATTGGAGACACTGAACCGAAAGATTCCGGCTTGGTGGGCGAGGACTCTGCAGCGTTTGATTTTGAGGAGCAGAAGATATCTTCGTGGATTTATTTCACGGTGATTTTGGGTGTAGTTCTGATTGTTCTTAATGTAGTTTGGATCGACAATTCCACCGGGTACGGTAAAGCTTTTATTGAGGCGGTTTCAGGACTTTCAGATAGTCATGAGGTGGTAATGTTGATCCTGATACTCATATTTGCCGGTGTCCACAGTGGCATGGCTAACTTTCGAGACACTGCTGAGAAGCTCATCGGAGAAAGAGCTTATCGTGTTCTTTTTGCCGGGATATCACTACCCTTGGCTGTCAGTACAGTTGTATATTTTATTAACCACAGATATGATGGACTTCAACTCTGGCAATTCCAGAATGTTCCTGGGGTTCACCATCTTGTGTGGCTGGCCAATTTCGTTTCCTTCTTTTTCCTATATCCTTCGACATTTAATCTTCTAGAAGTTGCAGCAGTTGACAAACCTAAGTTACATCTCTGGGAAACTGGCATCATGAGAATAACCAGACATCCTCAGATGGTTGGGCAGGTTATGTGGTGTGTAGCTCACACAATTTGGATTGGAAATTCTGTGGCTGTTGCTGCTTCTGTTGGCTTAATTGGACATCATCTATTCGGTGTTTGGAACGGAGACAGGCGACTCGCCAGAAGATACGGCGAGGATTTTGAGACTGTTAAAGCTCGTACTAGCATAGTCCCATTCGCGGCGATCCTTGATGGCCGGCAAAAGTTGCCGAAAGATTACTACAGGGAGTTTATCAGGTTGCCATACTTGACAATCACTGCAGTAACATTAGGAGCTTACTTTGCCCATCCCCTTATGCAAGCAGCTAGTTTCAACCTTCATTGGGGACAATGGACAGTGAAGAACAAGAATCGATCAGTGAATAAGTGCAACGTCTGCTTAGAGCTCACCACCCAATACTGTAACTACGGCCACGCCATTATTAATGAGGATGAAAACACATCTGATTCTGAACCCACCAGTTCTTCTGCTCATACTGTTGTCATCAATATGGTTGGCATGCTCACAGGTTTGGGGCAATTATCAGCGTCATATGCTGTAGTAGAGGGGGGGGGGGCGTGTCCAGTAATATTCCTGATGGGCCTTGCAATAACGAGTGCTTATAGCTGTCGTCTTCTTGGGAAATGCATGGACAAGAACCCTAAGCTACGAAGCTACTTAGACATTGTGAACATGCATTCGGATCAAAAGGAAGAATTCTGGCTTCAACCCTCATCTACACTGAGATCTTCATGGCCCTTGTCTCCTACACCATCTGACTACACGACAACCTCTTCACTCTCTTCATGGGATCTCGTTATCTCAACCATTCGCGTCTTCCCAAACCTTTCCTCCATCTCTTTCCTCTCCACTGCTGGTGTTCTCATGTCTCTCGTAATTTTCTTGTCTGTTGCCGCCACTCCCATTATCGGAGGCCTGGGATTCATGGGGGCGAAGATGTTTGGGGCACAAGTAAAGTCGCAGATAACTAATTTCAAACTGACGAAGATCGCAGTGTGGGCGACAGTGATAACACCAATGACCAAATATGCTCTTGAGTTCGCGCCATTTGCTATTCAGCTACAGCACAGGCTTCCCAGTTCGATGAGTAACAGAAGCAAGAAGATGATAAGAGGCACGATCTTTTTGAATCCTCTTGCTTCCATCATTGTGCAGATTTTGTATGTGAATGCAGCGAGAAGCCTCCCTTCACTCCCCAGGCCTTCTTTCCCAAGCTCACTCACCCCTCTTCACAACAATCAATCACTGATTCTCCTCCTTTTCTCTTCATCTTCCTCACAACTCGCCTTTCTGTTACAGGTAGATTATGTCCTACCATAA 2100 0.45 MAAPLVLSAHFSSIPHKTRNGSLSLSSSSVSTAIFMNPVSKPNKNDIFFLKNPSKEVLISRKFIACTSIGDTEPKDSGLVGEDSAAFDFEEQKISSWIYFTVILGVVLIVLNVVWIDNSTGYGKAFIEAVSGLSDSHEVVMLILILIFAGVHSGMANFRDTAEKLIGERAYRVLFAGISLPLAVSTVVYFINHRYDGLQLWQFQNVPGVHHLVWLANFVSFFFLYPSTFNLLEVAAVDKPKLHLWETGIMRITRHPQMVGQVMWCVAHTIWIGNSVAVAASVGLIGHHLFGVWNGDRRLARRYGEDFETVKARTSIVPFAAILDGRQKLPKDYYREFIRLPYLTITAVTLGAYFAHPLMQAASFNLHWGQWTVKNKNRSVNKCNVCLELTTQYCNYGHAIINEDENTSDSEPTSSSAHTVVINMVGMLTGLGQLSASYAVVEGGGACPVIFLMGLAITSAYSCRLLGKCMDKNPKLRSYLDIVNMHSDQKEEFWLQPSSTLRSSWPLSPTPSDYTTTSSLSSWDLVISTIRVFPNLSSISFLSTAGVLMSLVIFLSVAATPIIGGLGFMGAKMFGAQVKSQITNFKLTKIAVWATVITPMTKYALEFAPFAIQLQHRLPSSMSNRSKKMIRGTIFLNPLASIIVQILYVNAARSLPSLPRPSFPSSLTPLHNNQSLILLLFSSSSSQLAFLLQVDYVLP 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1932 699 Pfam Transmembrane amino acid transporter protein 414 483 IPR013057 -
Lele23g1932 699 Gene3D - 134 319 - -
Lele23g1932 699 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 1 368 - -
Lele23g1932 699 Pfam NnrU protein 140 359 IPR009915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1932 Lele-ChrLele23 22402994 22412198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1932 532 632 Amino Acid or Auxin Permease AAAP Family AT5G16740 51.887 1.95e-21 95.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0117 21 747537 753312 Lele23g1932 23 22402994 22412198 hybridization
Lele22g0122 22 699607 702060 Lele23g1932 23 22402994 22412198 hybridization