Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1930 ATGGCTAACACTATGGCTAAGTCCTTCCTCCAAGTTGCGGCAACTGAGGAGGCTGCGCCCCCCCTTCGAGTGATCCAGATGGAAGGATTGGTTATCTTGAAGATAATTAAACATTGTAAGGACCATTCACCTACCTTAGTCACCGGACAACTTCTTGGGCTTGATGTTGGCAGTGTTCTTGAAGTTACTAACTGTTTCCCCTTTCCGATAAGGGAAGAGGATGAGGAAATTGAGGCTGATGGTGCCAATTACCAGCTCGAAATGATGAGATGCTTGAGGGAGGTTAATGTTGACAATAATACTGTTGGATGGTATCAATCTACATTGCTAGGTTCCTTTCAGACTGTGGAGCTAATTGAAACTTTCATGAATTACCAGGAGAACATAAGACGCTGTGTTTGCATAATATATGATCCATCAAGGTCTGATCAAGGTGTCCTAGCTCTGAAGGCCTTGAAGCTCTCTGACACATTCATGGAACTCTATCGCAGCAACAATATTACAGGGGAGAAACTGAGGGAGAAAAACTTGTCATGGGTAGATATCTTCGAGGAGATACCTATCAAAGTTTCAAATTCAGCCCTTATCAGTGCCTTTATGACTGAGCTGGAACCCGATACACCAGTAACCCAGTGTGATTATGATCGTCTCCTATTGTCAACTAGTTCATTAATGGAGAGGAATATGGAATTTTTGATTGAATGCATGGACGATTTGTCAATAGAACAACAGAAGTTTCAATTTTATTACCGGAGCTTGTCACGCCAGCAGGCCCAGCAGCAAGCTTGGCTTCAGAAGAGAAGGGCGGAAAACATGGCACGTAAAGCTGCTGGAGAGGACCCATTGCCTGAGGAAGATCCAACAAATCCCATTTTCAAGCCAATCCCTGAGCCATCGCGATTAGACAGCTTCCTCATAACAAATCAAATTGCAAACTACTGCAACCAAATTAATGGTGTATCAGGGCAGAGCTTCAACAGACTCTATTTGATGAAGGCTCTACGCGACGATTGA 1014 0.4379 MANTMAKSFLQVAATEEAAPPLRVIQMEGLVILKIIKHCKDHSPTLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDTFMELYRSNNITGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLLLSTSSLMERNMEFLIECMDDLSIEQQKFQFYYRSLSRQQAQQQAWLQKRRAENMARKAAGEDPLPEEDPTNPIFKPIPEPSRLDSFLITNQIANYCNQINGVSGQSFNRLYLMKALRDD 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1930 337 CDD MPN_eIF3h 23 286 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lele23g1930 337 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 20 337 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lele23g1930 337 Pfam C-terminal region of eIF3h 144 335 IPR045810 -
Lele23g1930 337 MobiDBLite consensus disorder prediction 269 294 - -
Lele23g1930 337 SMART pad1_6 24 157 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele23g1930 337 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 24 126 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele23g1930 337 ProSiteProfiles MPN domain profile. 25 158 IPR037518 -
Lele23g1930 337 Gene3D Cytidine Deaminase, domain 2 1 217 - -
Lele23g1930 337 FunFam Eukaryotic translation initiation factor 3 subunit H 4 213 - -
Lele23g1930 337 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 17 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1930 Lele-ChrLele23 22392023 22396360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1930 88 337 Eukaryotic Initiation Factors Gene Family AT1G10840 82.800 7.32e-155 432