Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1921 ATGATATACGTGATGTACTGTTTGTTATATATATTCGGTGGTTGGAGACTGTGGGAATTGGAAAGTGTTGGTTTCAGACAAGCCGTTTTTTGGCAGATATTGGTTCGTTCGTGTTTTTCTTCCGTTATATATATACATAGGGAGCGTGTGTGGGCTTTAAACACTGCTTTCCTGCTGAAAGAGAAGGAAGTGGTGCCGGTTACGGCAAACCGGTTAGAGGCTGCCGATTCAGTGGTTGACGTTAGAGGCTCAGACTGTTTGGTCGGTCTAGAATGCTTTCTGAACATTGTCAGGGCACTGGGAATGGGATCATGCCTCTCTGTCACCCATCCCCTCCCTTATTCGCCGGAATCCTCTTCAGACAGTGCGAAGCGAAGGAGGAGATTGAGGAGCAGCTCTTCGCTTGACTCTAAAACGGAATTGGGCCTACATAAAATCCCTGGGAGAGTGTTCGTAAATGGATCCAATGAGGTTGCATCCCTGTTTTGCAAGCAAGGGAAAAAAGGGATCAACCAGGATGCCATGCTTGTTTGGGAGAACTTCTGTTCAAAGGACGCCATTTTTTGTGGAGTTTTCGATGGTCATGGTCCTAGTGGTCATAGGGTAGCAAGAAGAGTCAGGGATTCTTTCCCTTTAAAGCTTATTGCCCAATGGGAATTGCATCATAACAATAAGGATGGAAGTGATATCAGAAATGCTATGGCAAACCATAAGTCAGAGGAGATTGGATGTAGAATGGTTGATGAGAAATCTAGTCTTACTGATCATGAGCACGACTGCACCAATACTTTGAAGGTGCTGAAGGAATCTTTTCTGAAGGCTTGCAAGTTTATGGACAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGTGGGACAACGGCAGTCACCTTGGTCAAACAGGGCAAGGATCTTGTTATTGGAAATGTTGGGGATTCAAGAGCTATATTGGGCACTAGGGATCATGATAATTCTCTTATTGCTGTTCAGTTGACCATTGACCTGAAGCCAAATCTTCCAAGGGAAGAAGAGAGAATCAAGCGTTGCAGAGGAAGGGTATTTGCTCTTCGTAATGAACCTGAGGTTGCTCGAGTTTGGTTGCCCAATGCTGACTCCCCAGGCCTCGCTATGGCACGAGCTTTTGGAGATTTCATTCTTAAAGACTTTGGTCTGATATCTGTTCCCGATGTATCCCATCACCGCCTTACTGAGAAGGATGAATTTGTAGTATTAGCCACAGATGGGATTTGGGATGTTTTGTCCAACCAAGAAGTTGTAGACATTGTGGCATCTGTGTCACGCTCTTCCGCAGCTCGAACACTTGTTGAGACTGCCGTCCGAGCATGGAGGACAAAGTACCCTACTTCCAAAGTTGATGATTGTGCTGTAGTGTGTCTCTTTTTTGATTCAGATTCAGACTTGAAGTCAGTTTATTCCACAGACAAGGAGGAGCCCGAGGCAACGGTTAACCACCGATGTGAGGGATCTGCTCCTGAAACTGGAGTTAACTGTTCAGAAAAATCTATTGCTTCCCCTGAGAATTTTCATATGCTTGGGAAGAAAGGAGATGGAGTAGAAGCTGTATAG 1593 0.4501 MIYVMYCLLYIFGGWRLWELESVGFRQAVFWQILVRSCFSSVIYIHRERVWALNTAFLLKEKEVVPVTANRLEAADSVVDVRGSDCLVGLECFLNIVRALGMGSCLSVTHPLPYSPESSSDSAKRRRRLRSSSSLDSKTELGLHKIPGRVFVNGSNEVASLFCKQGKKGINQDAMLVWENFCSKDAIFCGVFDGHGPSGHRVARRVRDSFPLKLIAQWELHHNNKDGSDIRNAMANHKSEEIGCRMVDEKSSLTDHEHDCTNTLKVLKESFLKACKFMDKELKLHPDIDCFCSGTTAVTLVKQGKDLVIGNVGDSRAILGTRDHDNSLIAVQLTIDLKPNLPREEERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDFILKDFGLISVPDVSHHRLTEKDEFVVLATDGIWDVLSNQEVVDIVASVSRSSAARTLVETAVRAWRTKYPTSKVDDCAVVCLFFDSDSDLKSVYSTDKEEPEATVNHRCEGSAPETGVNCSEKSIASPENFHMLGKKGDGVEAV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1921 530 CDD PP2Cc 158 470 IPR001932 -
Lele23g1921 530 SUPERFAMILY PP2C-like 158 471 IPR036457 -
Lele23g1921 530 SMART PP2C_4 152 468 IPR001932 -
Lele23g1921 530 MobiDBLite consensus disorder prediction 120 134 - -
Lele23g1921 530 MobiDBLite consensus disorder prediction 113 136 - -
Lele23g1921 530 Pfam Protein phosphatase 2C 245 454 IPR001932 -
Lele23g1921 530 Gene3D - 153 472 IPR036457 -
Lele23g1921 530 PANTHER PROTEIN PHOSPHATASE 131 468 - -
Lele23g1921 530 ProSiteProfiles PPM-type phosphatase domain profile. 158 470 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1921 Lele-ChrLele23 22344641 22350386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1921 128 508 PP2C-type Phosphatase Gene Family AT1G16220 57.364 1.38e-150 439