Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1913 ATGTACCCTTCTCCCTCATCGTCCTCCTCACAGTCCCAAAGCGGTTTAACCCGCTACGGTTCCGCCCCGGGCTCTCTCCTCACCAACGCCGTCGATGCTGTTATTGGAGGAGCTGACCGCGAATTCTCCACTACTGCTGTTGGATCACGCCCTCCAGTGACCCATTTCTTCCCTGGCGAATCCTCCGAATCCTCCTGCAAGGTCAACCCATCCTCCGATCCAAAAGACAATCCTCCCAGGCTCGGATTGCAGAGATCCTACGGTCTCCATGACGGAGCCGCCATCGGCTTCGGCATCTCCTCTTCGGCTCTGCTTCGTCAGAGAAGCTCGCCAGCTGGCTTCCTCAGCCATCTCACCGCTACTCCCCCTGATAATGGAGGTTTCTCAATTTCAAGGGGCAGTGGAAGCTATAGCGCACAAGGGGCCTCCAATAGTGGCCATCGAATATCGAGGCTAAAATCTCAATTGAGCTTCACAGGGCAAGAATCTCTTTCTCAGATATCGGAGGTGAACGAACATGTTGATGGAATCAATTCTGACAATGGCCACCATAGAGTTACACATTCTTATGCCACAACCAGCTTTGGAATTGACACCTGGGATGGTTCAAACTCCATTGTGTTTTCTGCTCCCTCTAGTAAACGTGCTAAAAATATAGATGGTGACATTCTGAACTGTCTTAATGCCTTGGACTCTCAGTTTAGTCTGCCACAAACAACTCTGGAAATGGAAACAGTGGAGAAGCTACTTCAGATTCCTGAAGATTCTGTCCCCTGTAAAATTCGTGCTAAGCGAGGCTGTGCTACTCATCCAAGAAGCATTGCAGAACGGGAGAGAAGAACTAGAATTAGTGGGAAGCTGAAGAAGTTGCAAGAACTAGTGCCTAATATGGACAAGCAAACAAGCTATGCGGACATGCTGGATTTGGCTGTTCAACATATCAAAGGTCTACAAACTCAAGTTCAGAAGCTCCACAAAGAACTCGAGAATTGCAGCTGTGGATGTAAACAAAGCTCATAG 1020 0.4892 MYPSPSSSSSQSQSGLTRYGSAPGSLLTNAVDAVIGGADREFSTTAVGSRPPVTHFFPGESSESSCKVNPSSDPKDNPPRLGLQRSYGLHDGAAIGFGISSSALLRQRSSPAGFLSHLTATPPDNGGFSISRGSGSYSAQGASNSGHRISRLKSQLSFTGQESLSQISEVNEHVDGINSDNGHHRVTHSYATTSFGIDTWDGSNSIVFSAPSSKRAKNIDGDILNCLNALDSQFSLPQTTLEMETVEKLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVQHIKGLQTQVQKLHKELENCSCGCKQSS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1913 339 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 23 329 - -
Lele23g1913 339 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 317 IPR011598 GO:0046983
Lele23g1913 339 MobiDBLite consensus disorder prediction 58 72 - -
Lele23g1913 339 MobiDBLite consensus disorder prediction 1 23 - -
Lele23g1913 339 FunFam Transcription factor bHLH130 family 268 337 - -
Lele23g1913 339 Pfam Helix-loop-helix DNA-binding domain 272 318 IPR011598 GO:0046983
Lele23g1913 339 MobiDBLite consensus disorder prediction 43 85 - -
Lele23g1913 339 SMART finulus 273 323 IPR011598 GO:0046983
Lele23g1913 339 Gene3D - 268 337 IPR036638 GO:0046983
Lele23g1913 339 CDD bHLH_AtbHLH_like 272 324 IPR045239 -
Lele23g1913 339 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 270 333 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1913 Lele-ChrLele23 22290707 22295630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1913 15 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 50.975 6.99e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele23g1913 HLH 4.6e-09 No_clan