Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1912 ATGGTGAACCTCATGGACTGGCAGAAGCAGCAGCGCCAGCAGCAGAGTGGGAATGCCAACAATGGAAACGGAGGAATGATGTACGTGAAGGTCATGACGGACGACCAATTGGAGACTCTCAGGGAGCAAATCGCTCTCTATACCTCCATTTGCGAGCAGCTCGTTGAGATGCACAAGACTCTCACCGCTCAGCAGGATCTTGCAGGAGTTAGGCTGGGAAATATATATTGTGACCCATTGATGACTTCTGCTGGACACAAGATAACTTCCAGACAGAGGTGGACTCCAACGCCTGTGCAACTTCAAATTCTTGAGCGTATATTTGATCAGGGGAACGGAACTCCAAGCAAGCAAAAGATCAAGGAGATTACTGCTGAACTGAGCCAGCATGGCCAGATTTCTGAAACAAATGTCTATAATTGGTTCCAGAATAGGCGTGCTCGATCAAAAAGAAAGCAGCAAAATGTGGCACCTAATAACGGTGAATCTGAAGTAGAGACTGAAGTTGAATCTTCCAAAGATAAGAAAACAAAACCCGAGGAATTTCAGTCCCAACATAGTGCATCAACTAGGGCTGAAGATTTGTGCTTCCCGAATCATGAAGTGTGCTCTGACTTGCACTACTTGAATCCAGAGTCCTGTAAACCAGAATCCATGTTTCCATCAGATGGCAGTCTGAAAAATACAAGAAGTTTCGGCCAAATGTCTGTTTTTGATGGAATGCTATCAAACTCGAGGGATGGCTATATCACTGGAAAAATGCAAGTGCCAGGAAGCTACAATTTATACCAGCAACCTGGAGACTACAGCATGACGGGTTGA 822 0.4538 MVNLMDWQKQQRQQQSGNANNGNGGMMYVKVMTDDQLETLREQIALYTSICEQLVEMHKTLTAQQDLAGVRLGNIYCDPLMTSAGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPNNGESEVETEVESSKDKKTKPEEFQSQHSASTRAEDLCFPNHEVCSDLHYLNPESCKPESMFPSDGSLKNTRSFGQMSVFDGMLSNSRDGYITGKMQVPGSYNLYQQPGDYSMTG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1912 273 Gene3D - 93 157 - -
Lele23g1912 273 MobiDBLite consensus disorder prediction 166 182 - -
Lele23g1912 273 MobiDBLite consensus disorder prediction 149 191 - -
Lele23g1912 273 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 269 IPR044559 GO:0003700
Lele23g1912 273 MobiDBLite consensus disorder prediction 1 23 - -
Lele23g1912 273 Pfam Homeodomain 91 151 IPR001356 GO:0003677
Lele23g1912 273 ProSiteProfiles 'Homeobox' domain profile. 87 152 IPR001356 GO:0003677
Lele23g1912 273 SMART HOX_1 89 156 IPR001356 GO:0003677
Lele23g1912 273 MobiDBLite consensus disorder prediction 1 25 - -
Lele23g1912 273 CDD homeodomain 91 153 IPR001356 GO:0003677
Lele23g1912 273 SUPERFAMILY Homeodomain-like 89 154 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1912 Lele-ChrLele23 22285596 22288026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1912 27 273 Wox Gene Family AT4G35550 53.759 1.74e-90 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele23g1912 Homeodomain 1.3e-18 CL0123