Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1910 ATGTCAGACCCAACTAACCCCTTTTCCCTCTTTGCCTCGCAATCCCTTCCCTCGCTCCCTATATATATATGTACCTCTACATATAATTCTATCTCCATTCCCAAACACGCTTCTGCATCATCGTCATTATTATTACAGTCTATGAGAGCCATCAGGCACAGCTTTTCACTGTACAATTGGCGACCTTCTTCATCTTCTTCGCCCGCCTCTGCACTTTCATCTCTCCCAACTATTATCATGTCACAATCAGATCAATCTTCAGTTCTCGAAACGCCCAGATTGGTTCTCAAGAAGGTCTTGGCCAAATCTCAACATGAAGGCGACGGTGCTGTTGTCAGAAGAGCCCTTGGAAGGAGCGAGTTGAAGAGTTTGGATCCCTTTCTGATGATGGATCACTTCTCAGTGTCTCCACCTGGAGGTTTCCCTGACCATCCCCACAGAGGTTTTGAAACTGTCACATACATGCTGCAGGGAGCCATAACTCATCAAGATTTTGCTGGGCATAAGGGTACAATAAGAACAGGTGATGTTCAGTGGATGACCGCAGGCAGAGGAATAATTCACTCTGAGATGCCTGGAGGAGAAGGAACCCACAAGGGATTGCAGCTATGGATCAATTTATCTTCCAAAGATAAGATGATTGAACCAAATTATCAAGAACTTCCAAAAGAGGACATACCAGAAGCAGAACAAGATGGGGTTGAAGTGAGGGTTATAGCAGGAGAAGCAATGGGACTTCATTCCCCTGTTTACACTAGAACCCCAACCATGTTCCTTGATTTCACTATCAGCCCAGGAGCTGAATGGCATCAGAACATTCCAGAATCATGGAACGCCTTTGTTTATGTGATTGAAGGAGAAGGGATTTTTGGGTCTGCAAGTTCTTCACCTGTGGCGGCTCACCATGTGCTGGTCTTGACCATTGGAGATGGTCTAAGTTTCTGGAACAGATCTTCAAAGCCTCTGAGGTTTGTGTTGATTGCAGGGCAGCCACTGAATGAACCAGTGGTTCAGTATGGACCCTTTGTGATGAACACACAGTCTGAGATTGAAAAGACCATAGAGGACTATCAATATTGCAAGAATGGGTTTGAGATGGGGAGTTATTGGAGATCTCAACAGTAA 1125 0.4516 MSDPTNPFSLFASQSLPSLPIYICTSTYNSISIPKHASASSSLLLQSMRAIRHSFSLYNWRPSSSSSPASALSSLPTIIMSQSDQSSVLETPRLVLKKVLAKSQHEGDGAVVRRALGRSELKSLDPFLMMDHFSVSPPGGFPDHPHRGFETVTYMLQGAITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPGGEGTHKGLQLWINLSSKDKMIEPNYQELPKEDIPEAEQDGVEVRVIAGEAMGLHSPVYTRTPTMFLDFTISPGAEWHQNIPESWNAFVYVIEGEGIFGSASSSPVAAHHVLVLTIGDGLSFWNRSSKPLRFVLIAGQPLNEPVVQYGPFVMNTQSEIEKTIEDYQYCKNGFEMGSYWRSQQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1910 374 CDD cupin_pirin_C 255 331 - -
Lele23g1910 374 Pfam Pirin C-terminal cupin domain 258 363 IPR008778 -
Lele23g1910 374 Gene3D Jelly Rolls 227 332 IPR014710 -
Lele23g1910 374 PANTHER PIRIN-RELATED 80 373 IPR012093 -
Lele23g1910 374 CDD cupin_pirin_N 110 207 - -
Lele23g1910 374 Gene3D Jelly Rolls 106 358 IPR014710 -
Lele23g1910 374 SUPERFAMILY RmlC-like cupins 93 371 IPR011051 -
Lele23g1910 374 FunFam pirin 106 242 - -
Lele23g1910 374 Pfam Pirin 112 205 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1910 Lele-ChrLele23 22272554 22274373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1910 91 366 Calmodulin-binding Proteins AT3G59220 64.388 6.52e-132 377