Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1909 ATGAGAGCCATAAGGAACATTTTGGGGTTCAACAATTGGAGTGATTCTATTAATTCTACTCGTACCAATAGCAGAGAAGCTGTCTGTTTTGTTAGAAATATCATGTCTCAGTCAGATGAATCTCCTGCTTTTAGCAAACCCAGATTGGTACTCAAGAAGGTGCTTGCCAGAAATGTAAATGCAGGAAGTCGTCTAATGGTTAACAGGAACATTGCAAGCGAGTTCAAGGGTTTGGATCCTTTTCTGAATCTGGATCACTTTTCAGTGACTTATCCTGGAGGATTCACTGATCATCCACATAGAGGGTTTGAGACAGTCACCTATATGCTAGAGGGAGCACTAGTTCATCAAGATTTTATTGGCAATAAAGGAACAATAAGAGCTGGTGATGTTCAATGGATGTCTGCAGGCAGAGGGATCATTCACTCTGAGATGCCTGCAGGAGTGGGCACACATACAGGAGTGCAGCTTTGGCTCAATCTCTCCAAGAAAGACAAGATGATTGAACCAAAGTATCAAGATCTGGTAAAGGAGAGCATTCCAAGAGCAGAGAAAGATGGGGTTGAAGTGAAAGTGATAGCAGGCGAAGCATTAGGGGTTCAATCAGAGGTGTACACAAGAACTCCAGCCATGTTTCTTGATTTCAAGCTCAACCCACAAACCCAAGTGCAGCAGAACATTCCAGAGACTTGGAATTCCTTTGCCTATGTGCTTGAAGGAGAAGGAGTGTTTGGCTCACCAAGCTCATCTCCAATTGGACCCCACAATGTGGTGTTCTTGGGGCCTGGAGATGGTGTGAGTATCTGGAACAAATCTTCTGAGGCACTGAGGTTTCTGCTCATAGCTGGTCAGCCATTGAACGAGCCTGTGGCTCAGCATGGTCCTTTTGTGATGAACACACATTCTGAGATTGAGAAGGCCATGGAAGACTTTCATTACTGCAAGAATGGTTTTGAGAATGGCAAGCATTGGAGGTCTCAGTGA 984 0.4441 MRAIRNILGFNNWSDSINSTRTNSREAVCFVRNIMSQSDESPAFSKPRLVLKKVLARNVNAGSRLMVNRNIASEFKGLDPFLNLDHFSVTYPGGFTDHPHRGFETVTYMLEGALVHQDFIGNKGTIRAGDVQWMSAGRGIIHSEMPAGVGTHTGVQLWLNLSKKDKMIEPKYQDLVKESIPRAEKDGVEVKVIAGEALGVQSEVYTRTPAMFLDFKLNPQTQVQQNIPETWNSFAYVLEGEGVFGSPSSSPIGPHNVVFLGPGDGVSIWNKSSEALRFLLIAGQPLNEPVAQHGPFVMNTHSEIEKAMEDFHYCKNGFENGKHWRSQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1909 327 CDD cupin_pirin_C 209 285 - -
Lele23g1909 327 PANTHER PIRIN-RELATED 35 327 IPR012093 -
Lele23g1909 327 PIRSF Pirin 46 325 IPR012093 -
Lele23g1909 327 Pfam Pirin C-terminal cupin domain 212 317 IPR008778 -
Lele23g1909 327 CDD cupin_pirin_N 67 161 - -
Lele23g1909 327 Pfam Pirin 72 159 IPR003829 -
Lele23g1909 327 Gene3D Jelly Rolls 181 286 IPR014710 -
Lele23g1909 327 Gene3D Jelly Rolls 66 312 IPR014710 -
Lele23g1909 327 SUPERFAMILY RmlC-like cupins 73 325 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1909 Lele-ChrLele23 22269149 22270813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1909 45 322 Calmodulin-binding Proteins AT3G59220 58.363 1.71e-114 331