Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1908 ATGGCTGTGGCTAGTACTCAATTAGCTGGTCGTCATTACCGACATAACCCACAAGCAGAAGCAATGTTGGTGGTTAGACTCACCGAGATTGGTTGTGAAGAAGGTTTTAGCCAAATCTCTGCAGCAATCCGATGGAGCCCTTCTCAGAGGCTTTATTGGAAGTTGGAATGCTTGGATCCATTTGTGATGTTGATTCACTTCTCAGTGACTGCACCTGGAGGATTTCCTGATCATCCCCACAGAGGTTTCGAGGCTGTCACCTACATGCTGCAGGGAGCCATAAACTATGAAGATTTTGGTGGACACAGGGCTACTTTAAGAACAGGCGACGTTCAGTGGGTGAGAGCAGGAAGAGGAATAGTTCACTCAGAAATGCCAGCTGAAGAAGGAACCCACACCGGACTCCAACTCTGGATCAATTTATCTTCCAAACATAAAATGATTGAACCTCGGTGCCAAGAGGTTGTGAGCAAGGAGATACCGAGCGTAGAGATAGATGGAGCAGAAATTAGGGTTTTGGCCGGAGAAGCATTAGGGGTTAAAGCTCCAGTGTGCAGCAAGACTCCGATCATGTTGCTGGACGTCACCGTGAAGCCCGATTCACAAGTGCATTTGAGAACCCCAGAATCATGGTGGAACTACTTGGTCTACGTCATCGAAGGAGAGGCCGTGGTGGGGTGTGAGTCATCAGCGGCGATCACGGCAGAGCAGGTGGTGGTGCTGGGCGGAGGAGATGGAGTAAGCGTGTGGAACAAGTCGTCGGAGAAGGTGTTGAGGATGGTGGTGGCAGGTGGAGAGCCGTTGAAGGAGAAAGTGGCGCATAGGGGACCATTTGTGATGAACAGAGAGTCAGAGATAGAGGAAGCGGCGGAGGATTTTCGTCTCTGTAAAAATGGCTTCGAGATGGCAAAGTCTGGGAAATCTAATGCCTAG 933 0.4995 MAVASTQLAGRHYRHNPQAEAMLVVRLTEIGCEEGFSQISAAIRWSPSQRLYWKLECLDPFVMLIHFSVTAPGGFPDHPHRGFEAVTYMLQGAINYEDFGGHRATLRTGDVQWVRAGRGIVHSEMPAEEGTHTGLQLWINLSSKHKMIEPRCQEVVSKEIPSVEIDGAEIRVLAGEALGVKAPVCSKTPIMLLDVTVKPDSQVHLRTPESWWNYLVYVIEGEAVVGCESSAAITAEQVVVLGGGDGVSVWNKSSEKVLRMVVAGGEPLKEKVAHRGPFVMNRESEIEEAAEDFRLCKNGFEMAKSGKSNA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1908 310 Gene3D Jelly Rolls 161 268 IPR014710 -
Lele23g1908 310 PANTHER PIRIN-RELATED 54 308 IPR012093 -
Lele23g1908 310 SUPERFAMILY RmlC-like cupins 54 305 IPR011051 -
Lele23g1908 310 CDD cupin_pirin_N 47 141 - -
Lele23g1908 310 Pfam Pirin 54 139 IPR003829 -
Lele23g1908 310 PIRSF Pirin 44 307 IPR012093 -
Lele23g1908 310 Pfam Pirin C-terminal cupin domain 193 298 IPR008778 -
Lele23g1908 310 Gene3D Jelly Rolls 54 294 IPR014710 -
Lele23g1908 310 CDD cupin_pirin_C 189 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1908 Lele-ChrLele23 22263669 22266661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1908 56 304 Calmodulin-binding Proteins AT3G59220 55.200 8.38e-99 291