Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1897 ATGAAGCTCAAGCATCTCTGCGTCATTTTACCTGCAGATTCTGCCGAGTTTAAGCATAATCACCCACCATCAAAAGTGAACCAATCTTCCCAGAAAGAAACCATGAGAAAGAAACAACAACAACACAGGGCTTGTGGGGGTCAAGTTCTTGCCTTCCTTCGTGATTCTCTGAGCAAATTATATCACATAAATTGTTTGAGGTTTTGCCACAATGAAGTGGGGAAAGGGAAACAACAAGGCTCATCGGTAGTGCTGTTTCATGACATGGATGGAGTTCAACTCACTGCAAAGATTGGTGGGGACAGCCCAAGAATCTTCAGCTTCGCTGAGCTTTTCATAGGTTCTAATGGTTTCAGTGAGGATCACGTTCTTGGAAGTGGAGGATTTGGCAAAGTGTACAAGGCTGTTTTGCCCAGTGATGGAACAGTGGTTGCTGTTAAATGTTGCTTAGCAGAGAAAGGGCAACAATTTGAGAAGACTTTTGCTGCTGAATTAGCAGCCGTGGCCCATCTTCGACACAAGAACCTTGTCAGGCTCAGAGGTTGGTGTGTTCATGAAGATCAGTTGTACCTTGTTTATGATTACATGCCTAACCTCAGCCTCGACCGGATACTCTTTCGCCGGCCGGATAATCCAAATGCCGAGCCTCTTCTTGGTTGGGGAAGGCGTGGGAAAATCATCAAAGGTTTGGCAGCTGCATTATACTATCTTCATGAACAGCTAGAAACTCAGATCATTCACAGGGATGTGAAAACCAGCAATGTGATGCTTGATTCCCAGTACAATGCTCGGTTGGGTGACTTTGGTTTGGCAAGGTGGCTAGAACATGAGCTTGAGTATAATCATCATCAAAGCAGGAAAACAACATCAACCAAAATTGACCCTTTCAGGTTGGCAGAGACAACAAGAATTGGCGGCACAATTGGGTATTTACCCCCCGAGAGTTTCCAGAAGAAAAGCATCGCTACCTCGAAATCCGACGTGTTCAGCTTCGGCATAGTCGTTCTAGAAGTGGCATCTGGAAGGAGAGCTATTGATCTTGCATACCCTGATGATAAAATCATTTTGCTTGACTTTGTTAGAAGGCTATCTGATGAAGGAAAGCTCCTTGCAGCAGGGGATACTCGTCTACCAGATGGTTCCTACAAGCTTTCTGAAATGGAACATTTACTTCACATAGGCCTTCTTTGTACACTCCATGAACCACAATCAAGGCCAAGCATGAAATGGATTGTAGAAGCACTTTCTGATGCTTCAAGCCCATTACCAGCTCTTCCTTCTTTCCATTCCCACCCTTTATATATCACTTTATCTTCTCCATCTGATACAAGTCTCAGCAGCACGACAAATGCCTCCAGCACTGTCACAGAAAATGTCAGCACAATCACAAACTATTCTTCATCCAACTATGTTACAGCAAATGGGAAAACAATATACATGACAGCTGAAGATAGAAACAGCGGAATCTCCTCTGCGAAGAGCACCCATCGCCACGCATCGTTTCCTGTGGTTGAAGCTCCAAGGGAGATATCATACAAGGAACTTGCCTTGGCTACAGATCATTTTTCAGAGTCAAGGAAGGTTGCAGAGCTGGACTTTGGAACTGCCTACCATGGAATCCTTGAGGATCGTTGCCATGTCATGGTGAAACGCCTTGGAATGAAGACTTGCCCTGCGTTGCGCGAAAGATTCTCTAATGAACTGCGAAATCTAGCCAGGCTTCGCCACCGGAATCTGGTGCAGCTTCGAGGATGGTGTACTGAGAAAGGGGAAATGCTTGTTGTGTATGATTACTCTGCAACAAGACTTCTCAGTCACAATCTTCTCCATAATAACAACAATCATCATAGAGATGGGTGTTCTGTCCTGCAATGGCATCATAGATACAATATCATAAAATCACTAGCTTCTGCCATTCTTTATCTTCATGAGGAATGGGAAGAACATGTAATTCATAGGAACATCACTTCTTCAGCTGTTGTCCTTGAGCCGGATATGAACCCAAGACTCAGCAGTTTTGCCCTGGCTGAATTTTTGACCCGGAATGAGCATGGCCATCATGTAATCAAAGACACCAGCAAATCGGTTCGAGGGATTTTCGGCTACATGTCGCCGGAGTATATAGAATCTGGCGAAGCTACCTCCGCTGCTGATGTTTACAGTTTTGGCGTGGTGGTGCTCGAAGTTATCAGTGGACAGATGGCGGTGGACTTCCGGCAGCCCGAGGTGCTATTGGTGAAGAAGGTTCATGAATTTGAGACAAGAAAAAGACCACTGGAGGATTTAGCAGACATGAGGCTCAATGGAGGGTACAATTACAAAGAACTGATGAGATTGGTAAAGCTAGGAATTGCATGCACCAGATCTGACCCACAATTAAGACCAAGCATGAGACAAATAGTAAGCATCCTTGATGGAAATGACAGATTGATCTTGGAGAAAAAACAGAAAGAGAGCACGGAAGAATGGAAAGAAAGAAATGCTTATTCATTGTCATTGATCAGGGGAATCCAAGCTCTGGGAATACGTTGA 2532 0.4459 MKLKHLCVILPADSAEFKHNHPPSKVNQSSQKETMRKKQQQHRACGGQVLAFLRDSLSKLYHINCLRFCHNEVGKGKQQGSSVVLFHDMDGVQLTAKIGGDSPRIFSFAELFIGSNGFSEDHVLGSGGFGKVYKAVLPSDGTVVAVKCCLAEKGQQFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRPDNPNAEPLLGWGRRGKIIKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYNHHQSRKTTSTKIDPFRLAETTRIGGTIGYLPPESFQKKSIATSKSDVFSFGIVVLEVASGRRAIDLAYPDDKIILLDFVRRLSDEGKLLAAGDTRLPDGSYKLSEMEHLLHIGLLCTLHEPQSRPSMKWIVEALSDASSPLPALPSFHSHPLYITLSSPSDTSLSSTTNASSTVTENVSTITNYSSSNYVTANGKTIYMTAEDRNSGISSAKSTHRHASFPVVEAPREISYKELALATDHFSESRKVAELDFGTAYHGILEDRCHVMVKRLGMKTCPALRERFSNELRNLARLRHRNLVQLRGWCTEKGEMLVVYDYSATRLLSHNLLHNNNNHHRDGCSVLQWHHRYNIIKSLASAILYLHEEWEEHVIHRNITSSAVVLEPDMNPRLSSFALAEFLTRNEHGHHVIKDTSKSVRGIFGYMSPEYIESGEATSAADVYSFGVVVLEVISGQMAVDFRQPEVLLVKKVHEFETRKRPLEDLADMRLNGGYNYKELMRLVKLGIACTRSDPQLRPSMRQIVSILDGNDRLILEKKQKESTEEWKERNAYSLSLIRGIQALGIR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1897 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Lele23g1897 843 Pfam Protein tyrosine and serine/threonine kinase 526 804 IPR001245 GO:0004672|GO:0006468
Lele23g1897 843 FunFam Receptor like protein kinase S.2 196 421 - -
Lele23g1897 843 Gene3D Phosphorylase Kinase; domain 1 484 598 - -
Lele23g1897 843 Pfam Protein kinase domain 119 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1897 843 Gene3D Phosphorylase Kinase; domain 1 92 195 - -
Lele23g1897 843 SUPERFAMILY Protein kinase-like (PK-like) 500 804 IPR011009 -
Lele23g1897 843 ProSiteProfiles Protein kinase domain profile. 522 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1897 843 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Lele23g1897 843 MobiDBLite consensus disorder prediction 18 40 - -
Lele23g1897 843 PANTHER - 82 417 - -
Lele23g1897 843 Gene3D Transferase(Phosphotransferase) domain 1 605 831 - -
Lele23g1897 843 FunFam Receptor like protein kinase S.2 600 828 - -
Lele23g1897 843 Gene3D Transferase(Phosphotransferase) domain 1 196 420 - -
Lele23g1897 843 FunFam Receptor like protein kinase S.2 92 195 - -
Lele23g1897 843 ProSiteProfiles Protein kinase domain profile. 118 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1897 843 SUPERFAMILY Protein kinase-like (PK-like) 102 445 IPR011009 -
Lele23g1897 843 SMART serkin_6 118 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1897 Lele-ChrLele23 22168025 22170556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1897 506 807 Receptor kinase-like Gene Family AT5G59270 39.604 1.08e-58 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele23g1897 Pkinase 1.2e-41 CL0016