Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1894 ATGGATTACAAGTTTCCCAAGATGGAAATCTCCAGGCAAAAGGAATTTTCAACTTGCTTTAAAGAAACGGCAATGGGATCAAAGATTTGGGGCGATTCAATCATTAGAAGCTCTCAGACTCCCACTGCTTCTCATCACATCCATTTAGCAATGGGGATGGATTCAATTTCATCAGAAAAGCTTCTTTCAATTTCAGATTCTACGTCAACAATAGAAGAGCTAAGAGGAGCCACTTTCACTAGTTTTCTCCCTCGAAGGTTCAGTGATCAAGAGGAAATCACCCAAGTGCAACAGGAAAATCAATCCCTTTGTGAATTCAATCCCATCTGTACTCCAAATGCTTCAACCTCAGGAACCAGAGAAAGGGCCCAAAGTTTCCTTCCTCTAAATCTGTTGGAAACACTTCCAGCATTACCAAGAGCAGATGCATCTGATGAGTCAGCTTCTTCAACTGCTACACCTAGATTTCCATATTTGACGTTGTTTCTGCAGGATCCCTTCATGTTATTTTCATCATCCTCAAAGGTCACAGAGTCGCTAGGCAAGCCCAAAAATTGTGAATCTCAGCCAACAATTTCAGACACTTCATTTTCTGTGTCCCGGTGTCATGCAATTCAGAGCCAGGCAGTTACCGATCCACTCAAAATGAATCAGAATCTTAAAAACGTCCGATCCAAGTCTTTTAATGACTACTGCTTGAGAACCACCAAGACTCAGCCCATGAAGTTTGCTGGACGGGGAAAGCTGTTTAAGGGGGTGAGGCAAAGACACTGGGGAAAATGGGTTGCAGAGATTAGACTACCAAGGAATAGAACGAGGGTTTGGCTGGGGACATTTTACACAGCTGAAGAAGCAGCCATGGCCTATGACACAGCAGCATACATACTTCGTGGAGAATATGCTCAACTAAACTTTCCAGATCTAAAGAGTCATATTAAGGCCAATTCTTTGAATGGAACAACAGCTGCGCTACTGGAGGCAAAGCTTCAAGCAATATCACAAGGAATTTCTTCTCCAAGAGTGCCCACTGATTCCCTGCCAGGATCATTGGATAAGAACCCAGTCGAGAACGCCAAAATCAATGGTAAAACTCAGAATCCAGCTAAAAGAGAATGGCAGTTTGAGATAGAGAACAAGGTTGGAGCAGATACAATTGAGAGAAGAAAAAACAATCATCAAGAGGTATCGGACATGGAAGCTATTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATTCCCTTTTAGTCTCCGATTCATGA 1272 0.4269 MDYKFPKMEISRQKEFSTCFKETAMGSKIWGDSIIRSSQTPTASHHIHLAMGMDSISSEKLLSISDSTSTIEELRGATFTSFLPRRFSDQEEITQVQQENQSLCEFNPICTPNASTSGTRERAQSFLPLNLLETLPALPRADASDESASSTATPRFPYLTLFLQDPFMLFSSSSKVTESLGKPKNCESQPTISDTSFSVSRCHAIQSQAVTDPLKMNQNLKNVRSKSFNDYCLRTTKTQPMKFAGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFYTAEEAAMAYDTAAYILRGEYAQLNFPDLKSHIKANSLNGTTAALLEAKLQAISQGISSPRVPTDSLPGSLDKNPVENAKINGKTQNPAKREWQFEIENKVGADTIERRKNNHQEVSDMEAIQLSRMPSLDMDIIWDSLLVSDS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1894 423 Gene3D AP2/ERF domain 249 307 IPR036955 GO:0003700|GO:0006355
Lele23g1894 423 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 111 418 - -
Lele23g1894 423 SMART rav1_2 249 312 IPR001471 GO:0003700|GO:0006355
Lele23g1894 423 PRINTS Ethylene responsive element binding protein signature 272 288 IPR001471 GO:0003700|GO:0006355
Lele23g1894 423 PRINTS Ethylene responsive element binding protein signature 250 261 IPR001471 GO:0003700|GO:0006355
Lele23g1894 423 CDD AP2 248 308 IPR001471 GO:0003700|GO:0006355
Lele23g1894 423 SUPERFAMILY DNA-binding domain 249 307 IPR016177 GO:0003677
Lele23g1894 423 Pfam AP2 domain 250 298 IPR001471 GO:0003700|GO:0006355
Lele23g1894 423 FunFam Ethylene-responsive transcription factor 2 248 307 - -
Lele23g1894 423 MobiDBLite consensus disorder prediction 338 367 - -
Lele23g1894 423 ProSiteProfiles AP2/ERF domain profile. 249 306 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1894 Lele-ChrLele23 22149315 22151069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1894 127 418 AP2-EREBP Transcription Factor Family AT4G13620 43.333 4.03e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele23g1894 AP2 6.8e-12 CL0081