Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1888 ATGACAATAAATCACAATACAGTATCTCATTTCTCTCTTCTGCATATATCAGGCCATGGTTTAAGTTCCCAGATTCATTCTCAAATCAATCTTAATAATAACTCACAGCAACGTAGAGCGGGAGTCACCTTAAGAGAGCTTGATGAAGAAGCAAGCTCAGATAATAATCAGGCCAGAAGCAATTATAGTGGAGCTGTTACTCTTGCTCCTACTCCTGTGAGTGTTTATCGTCCTTCTGCAACAAATAATGAGAATGACGATGATGATGGTATAACTCATAGCCTTCCTTATAAGAAATATGGGCCCTACACATGCCCAAGGTGTTTTGGGAAGTTTCCAACCTCACAGAAATTTGCGGCTCACGTGAGCTCTCACTACAAACATGAAACTAAAGCTCAGAGGAGGAGGAGGCTTATGGCCAAAATCAGAAGAAGAAATCTCCGCCTTCACCACTCAAGGGAGGGAATTACTCTTCTTCCCACACAACCAGTTGCTCAGCCCGAACCTACCAATATGGCTGAAGCAGAAGCTAATGGTGATGGTGGAGTGTTATCTATAGTCCAAGTCAAGGAAGAAGCTGCTGATTTTTAA 591 0.423 MTINHNTVSHFSLLHISGHGLSSQIHSQINLNNNSQQRRAGVTLRELDEEASSDNNQARSNYSGAVTLAPTPVSVYRPSATNNENDDDDGITHSLPYKKYGPYTCPRCFGKFPTSQKFAAHVSSHYKHETKAQRRRRLMAKIRRRNLRLHHSREGITLLPTQPVAQPEPTNMAEAEANGDGGVLSIVQVKEEAADF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1888 196 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1888 Lele-ChrLele23 22081381 22087571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1888 85 192 C2H2 Transcription Factor Family AT2G15740 49.074 6.59e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele23g1888 None None None