Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1882 ATGGCTTCTTCTCTGAATCCTCTTCTCCTCTGTTTTCTGATTTTGTGCCTGCCTTCTATTTGTGTTGTTGCCCAAACCAGAACCAGTAATAACGTGGGCGATTCTTTCACTGCAGGAGATGGCAATACCCCATGGATGGTTTCACCTTCTGGGGATTTTGCCTTTGGGTTTCAACAACATAAAAATAATAGTTTCTTCTTGCTCTCCATCTGGTATGCCAACATTCCCAACAAAACCATCGTTTGGTATGCGAATGGAGGCAGTCCTGCTCCAAAGGGGTCAAGAGTTCAGATTACTGTAGCAGAAGGGCTTAAGCTTACTTATCCTGATGGTCGGATTCTTTGGACACCAGAAAATAGGCCTGCTGGTACTGTTGCTTCTGGTGCCTTGAATGACTCCGGCAACTTTGTTCTTCAGGATAGCAGATCTAACTCTGTCTGGGAGACCTTCAAGAATCCTAAAGACACCATGTTGCCCTCACAAATTTTGGAGAAAGGAGGAAAGCTTTCTTCTCGGAAGTCAGAGGCTGATTTCTCGCAGGGAAGGTTTCAACTTGTTCTTCAGGATGATGGTAATCTTGAGATGCATACTGTAAACTTACCATCTGAGTATGCTAATGAAAATTATTTCGAAACTACTACTGGTTCCGATACATCAAGTCCTGGAATTCAACTGGTCTTCAACGAATCTTCGGGAGACCTTTATGTAAAAAGGAACAACAGTGATAGATACACCTTCTCAACCCTGAGCATAGGCTCTCCGACTCAATATTATCTTCGAGCTACTCTTAATTTTGATGGAGTTTTCACTTTCTATCAACATCCTAAGAGTTCCTCTGGAACTTGGACACCTATCTGGTCCAAGCCAGATAATATCTGTCGTGCTACGATCAGCGAAGGAACAGGCATTTGCGGATATAATAGCATTTGTAGATTGGGTGATAATAGTAGACCAAATTGTACATGCCCACCAGGTTATTCCTTACTAGATCTTGATGACCCAAATGGTAGTTGTAAACCAGATTTCGTACAGGGCTGTAAAGAAGATGAGTTTAGTCAAGGGAAAGATCTATATGACTTTGAGGTGTTGACAGATATAGATTGGCCTTACTCTGATTATGCGCTTCTAAAGCCTTTTACTGAAGATGAGTGCCGAAGGGCCTGCATGGAAGATTGCTTTTGTGCCGTTGCCATTTTCAGAGCAGGTGACAGTTGCTGGAAGAAGAGGTGGCCACTTTCAAATGGCAAGTATGACACGAGTCTTAATGCTGGTAAGGCCTTAATCAAGGTAAGGAAGGACAATTCCTCCCTAATTGGTCCTCCTCGTCCTTCAATCATCGAAAGAAAGAATAAGGACACTTTGATTTTGGCGGGCTCTGTCCTCTTGGGTAGCTCTGCCTTTCTTAATCTCCTATTAATTGGAGTATTCTGTCTAGGCTTTTCCTACATTTACCAATTCAAGAAGAAGCTTAAGAATGTTTACCGAAGTGACATTGCTGTTGAAACCAATTTGCGTTGTTTTACTTATAAGGAGCTTGAAGAGGCTACAAATGGATTCAAGGAAGAGTTAGGAAGAGGAGCTTTTGCTGTTGTTTATAAAGGAACCATAAACACGGGTTCTTCAGTACCTGTGGCGGTCAAAAGGTTGAACAACTTCCTTTTTCAAGAAACTGTGAAGGAATTCAAGAATGAAGTCAATGTCATTGGCCAGACCCATCACAAGAATCTGGTTCGTTTGCTTGGGTTCTGTGAGGAGGGAACAGAAAGGATGCTTGTATATGAGTACATGAGCAATGGCACATTAGCAGGCCTTATTTTCAGTGACTCAAAACCCAATTGGAACCTACGACTAAAAATGGCATTTGGGATTGCAAGAGGACTTGTTTATTTACATGAAGATTGCGGCACCCAGATCATCCACTGCGACATAAAGCCTCAAAACATACTCCTTGATGACTACTTGAATGCTCGTATCTCTGACTTCGGATTGTCCAAGCTCTTAAAGATGAATCAGAGCCGAACCCATACAGCTATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAGAACATGCCCATCACGGCCAAAGTAGATGTCTATAGTTTTGGTGTATTGCTGCTGGAGATTGTCTGTTGTAGAAGAAGTGTGGACATGGAACCAGAGAATGAGGAGAGAGCAATCTTAACAGATTGGGCTTATGACTGCTACACAACAGGTTCTCTGGAAGCTTTGGTTGAAGAAGATGAGGAGGCACTGAATGACAAGAAGAACCTGGAGAAGTTAGTAATGATTGCCATATGGTGTACTCAAGAGGAGCCAACTCTGAGACCCACAATGAGAAAGGTTTCTCAGATGCTTGAGGGAGTTTCTGAAGTGCCTGCTCCACCATGCCAGATCCTAAATAGTGTGACTCGAGATCACTATATCTCACCCACTTTGGATGATTGA 2454 0.4271 MASSLNPLLLCFLILCLPSICVVAQTRTSNNVGDSFTAGDGNTPWMVSPSGDFAFGFQQHKNNSFFLLSIWYANIPNKTIVWYANGGSPAPKGSRVQITVAEGLKLTYPDGRILWTPENRPAGTVASGALNDSGNFVLQDSRSNSVWETFKNPKDTMLPSQILEKGGKLSSRKSEADFSQGRFQLVLQDDGNLEMHTVNLPSEYANENYFETTTGSDTSSPGIQLVFNESSGDLYVKRNNSDRYTFSTLSIGSPTQYYLRATLNFDGVFTFYQHPKSSSGTWTPIWSKPDNICRATISEGTGICGYNSICRLGDNSRPNCTCPPGYSLLDLDDPNGSCKPDFVQGCKEDEFSQGKDLYDFEVLTDIDWPYSDYALLKPFTEDECRRACMEDCFCAVAIFRAGDSCWKKRWPLSNGKYDTSLNAGKALIKVRKDNSSLIGPPRPSIIERKNKDTLILAGSVLLGSSAFLNLLLIGVFCLGFSYIYQFKKKLKNVYRSDIAVETNLRCFTYKELEEATNGFKEELGRGAFAVVYKGTINTGSSVPVAVKRLNNFLFQETVKEFKNEVNVIGQTHHKNLVRLLGFCEEGTERMLVYEYMSNGTLAGLIFSDSKPNWNLRLKMAFGIARGLVYLHEDCGTQIIHCDIKPQNILLDDYLNARISDFGLSKLLKMNQSRTHTAIRGTKGYVALEWFKNMPITAKVDVYSFGVLLLEIVCCRRSVDMEPENEERAILTDWAYDCYTTGSLEALVEEDEEALNDKKNLEKLVMIAIWCTQEEPTLRPTMRKVSQMLEGVSEVPAPPCQILNSVTRDHYISPTLDD 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1882 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 596 796 - -
Lele23g1882 817 ProSiteProfiles Protein kinase domain profile. 517 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1882 817 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 799 - -
Lele23g1882 817 Gene3D - 153 285 IPR036426 -
Lele23g1882 817 SMART blect_4 35 153 IPR001480 -
Lele23g1882 817 FunFam S-receptor-like serine/threonine-protein kinase 487 595 - -
Lele23g1882 817 PIRSF SRK 1 814 IPR024171 GO:0004674
Lele23g1882 817 Pfam D-mannose binding lectin 79 163 IPR001480 -
Lele23g1882 817 ProSitePatterns Protein kinases ATP-binding region signature. 523 547 IPR017441 GO:0005524
Lele23g1882 817 CDD STKc_IRAK 523 790 - -
Lele23g1882 817 SMART serkin_6 517 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1882 817 Coils Coil 743 763 - -
Lele23g1882 817 SUPERFAMILY Protein kinase-like (PK-like) 500 789 IPR011009 -
Lele23g1882 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 151 - -
Lele23g1882 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Lele23g1882 817 ProSiteProfiles Bulb-type lectin domain profile. 33 151 IPR001480 -
Lele23g1882 817 CDD PAN_AP_plant 352 430 - -
Lele23g1882 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 196 IPR036426 -
Lele23g1882 817 FunFam Serine/threonine-protein kinase 154 296 - -
Lele23g1882 817 Gene3D Transferase(Phosphotransferase) domain 1 596 796 - -
Lele23g1882 817 CDD B_lectin 39 153 IPR001480 -
Lele23g1882 817 Gene3D - 31 152 IPR036426 -
Lele23g1882 817 Pfam Protein tyrosine and serine/threonine kinase 519 788 IPR001245 GO:0004672|GO:0006468
Lele23g1882 817 Gene3D Phosphorylase Kinase; domain 1 491 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1882 Lele-ChrLele23 22053109 22055562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1882 503 790 Receptor kinase-like Gene Family AT1G60800 42.177 3.11e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele23g1882 PK_Tyr_Ser-Thr 3.5e-47 CL0016