Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1873 ATGCGTCGGTGGCTTTGTTGTTCTTGTAACATTGAAGAGCCTTACCCTTATGAAAACGAGCACCTTAAAAGCCCAAGGAACTATGGAGATGGTAATCCAAAAGCCCCAAAGGCTTCAGCTCCTGTTAAACCTGAAACACAAAAGGCTGCACCACCTATTGAAGTGTCAGCATTAGCTTTAGATGAACTAAAAGAAATGACTGACAACTTTGGGTCAAAGGCATTGATCGGTGAAGGATCTTATGGGAGGGTATATTATGCAACTATAAACAATGGAAAGGCCGTGGCTGTGAAGAAGCTTGATGTTTCATCAGAACCTGAATCCAATGTTGAGTTTTTGACCCAGGTTTCGACGGTCTCAAGAATGAAGCATGAAAATTTTGTTGAGCTGCATGGTTATTGTGTTGAAGGAAATCTTCGTATACTTGCATATGAGTTTGCAACTATGGGCTCTCTTCATGACATATTGCACGGTAGGAAGGGAGTTCAAGGGGCACAACCAGGGCCAACCCTTGACTGGATGCAACGAGTTCGAATTGCAGTTGATGCAGCAAGGGGGTTGGAATATCTACATGAGAAAGTTCAGCCAGCTATCATACACAGAGATATCCGATCAAGCAACGTACTAATTTTTTATGATTACAAAGCAAAGATAGCTGATTTTAATCTTTCAAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCCACTCGAGTGTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACTGGTCAGTTGACTCTAAAAAGTGATGTCTACAGTTTTGGCGTTGTTCTTCTTGAGCTCCTTACAGGGAGAAAACCTGTTGACCATACCATGCCTCGAGGACAGCAAAGTCTGGTTACATGGGCTACTCCAAGACTGAGTGAAGATAAAGTCAAACAATGCGTTGATCCAAAACTGAAGGGAGAATATCCTCCTAAAGGAGTTGCCAAGCTGGCAGCTGTTGCAGCACTTTGTGTGCAGTACGAAGCCGAGTTTAGGCCGAATATGAGCATCGTGGTCAAGGCGCTGCAACCACTTCTGAAGGCTCCTCCTCCTCCTCCTGCTCAAGCACCGGAAATTTGA 1098 0.4444 MRRWLCCSCNIEEPYPYENEHLKSPRNYGDGNPKAPKASAPVKPETQKAAPPIEVSALALDELKEMTDNFGSKALIGEGSYGRVYYATINNGKAVAVKKLDVSSEPESNVEFLTQVSTVSRMKHENFVELHGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPAIIHRDIRSSNVLIFYDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTLKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPPPPPAQAPEI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1873 365 FunFam PTI1-like tyrosine-protein kinase 3 148 357 - -
Lele23g1873 365 FunFam PTI1-like tyrosine-protein kinase 3 33 146 - -
Lele23g1873 365 MobiDBLite consensus disorder prediction 19 47 - -
Lele23g1873 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 356 - -
Lele23g1873 365 SUPERFAMILY Protein kinase-like (PK-like) 52 348 IPR011009 -
Lele23g1873 365 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1873 365 Gene3D Phosphorylase Kinase; domain 1 42 146 - -
Lele23g1873 365 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Lele23g1873 365 SMART tyrkin_6 70 348 IPR020635 GO:0004713|GO:0006468
Lele23g1873 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 198 210 IPR008266 GO:0004672|GO:0006468
Lele23g1873 365 Pfam Protein tyrosine and serine/threonine kinase 75 348 IPR001245 GO:0004672|GO:0006468
Lele23g1873 365 Gene3D Transferase(Phosphotransferase) domain 1 148 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1873 Lele-ChrLele23 21997594 21999890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1873 52 349 Receptor kinase-like Gene Family AT4G02010 48.505 2.20e-91 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele23g1873 PK_Tyr_Ser-Thr 4.8e-46 CL0016