Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1857 ATGTTAGGCAAGTTCCGGCACTCCTCGAATCTTCAACCTCCGGTTTCCTCCGTTCATCCCCTCCGAAGAGGTTTATCTGGAGTGCAAATATTGTATTTTGGCTCGTTTTCTAATGCACTTGACCAGAAAGCTTGCTTTGAAGTTTTATTATCTTTATTTTTGATGGACTGCAATAAAGAAGAGGCCTTACGGGCCAAGGTCATTGCTGAAAAGAAGATGGAAAGTAAAGATTTTGTTGGGGCTCGTAAAATTGCTCTTAAAGCTCAGCAACTATATCCTGATCTGGAGAATATAACTCAAATGCTTATTGTATGTGATGTGCACTGCTCTGCTGAGAAGAAATTGTTTGGGAATGAGATGGACTGGTATGGAATTCTTCAAATTAGGCAATCAGCTGATGAGACAATGATAAAGAAACAATACAGGAAGTTTGCCCTCCAACTTCATCCTGACAAGAACAAGTTTTCTGGTGCAGAAGCTGCATTTAAGCTAATTGGGGAAGCTCAAAGAGTACTTTTGGATAAAAATAAACGGGCTCTACTTGACATGAAGTACAAAGTTCCTATGAACAGAACTTCAAAGCCATATCATCCGCCTCCGGCACAGAAGTTTCGTACAAATGTGAATGCTGGGGTGCAAAACAATGTCAGGGCCAATTTTTCCAACGTGAATCCTCAGAAGCAGCAACAGCCTAGGCAGTCAACTCAGCAGGGACCCAATGGTAGCCGCCCTACATTTTGGACTTTCTGCCCATTTTGTTGTAGTAGATATGAGTTGCACTCTGAAGCTGTAAATAGATCTGTTTCCTGTAACACTTGTCATAGGCCCTTTATTGCATATGTGCTAGGTACATCAGCAGCATCGGCGGCAGCTAATTCAAGTTCTCAATCTTTTGGCCAACAAAAAGATGGTTTCAATCATGGTGCTGATGTTGGATCTCAAGGTATGAATGCTGGGAATGTCAATACAAAGCCTTCTGCGAAAAAAGGCCCCAGCATCTCTGATAAGCTGAATAGAAAGAGAAAGAGGAAGAAGGTAGAAGAATCTAGTGAAAGTGCTGATTCCTTGGACAGCAATGAGTCTGAAGATGATATGGTTGTTGACAAGGATGGTGTTCCTGGTGAACAAAACTTTCCAACTGATCGAGAACAGCATCGGCGTAGATCTGCAAGGTCTAAGCCTCAGGTTGTTTATAATGAGAATGGGAGTGATGATGATGATGACCTTTCAAAGCCCTCAACAGGGGCCAAGGGAAGTGGCTCATGTGGTGCAGAAGAAGACAATGGGGAGACAGCTAAAATGAATAATCGAAATGGCTCGGCTGCTGACCTGAAGGATGATCAGAAAGAGGTGAAACAGAAAGACAATCGTTATTCTGAAGAGAGCTTACACAAGAGAAATGAGGAAACTATGGGCACGAGGGGAAAAGAAGCAAACCAGTGCTCAAAGGGGACAGGAGAAACAGAAGGTACGACTTTTTTTGTCTATCCTGATGCAGAGTTCAGTGACTTTGAAAAGGACAAGAAAGAAGATAGTTTTGCAAATGGACAGATTTGGGCTATATACGATACAATTGATGGCATGCCGAGATTCTATGCTTTGATCAGGAAAGTTCTCTCTCCTGGGTTCAAGCTGCGAATAACATGGTTTGAAGCAGAGCCAGATGACGAGGATGAAATCAGCTGGGTAGAAAATAATCTGCCAGTTGCTTGTGGGAAGTATGTGCTTGGCAACACTGAAATTTCTGAAGATCGTCTTATGTTCTCACATCTTATTTCATGTGAAAAGATTGGCCGCAGTACTTTCAAAGTTTATCCTAGGAAGGGGGAAACTTGGGCTCTGTTTAAAAATTGGGATATCAAATGGTACACTGATGTGGAATCTCATCAGATGTATGAATTTGACTTTGTTGAAATTTTGTCCGATTATGTTGAAGGGGAGGGGGTATCTGTTGCATACTTGGAGAAGTTGAAAGGTTTTGTGAGTCTCTTCGCTCGAGCAAACAAGGGCAATATGGATTCATTTCGAATCCCATCAGCGGAGTTATTTAGATTCTCTCATAGGATTCCTTCATTTAAAATGACCGGTCAGGAAAGAGTAGATGTCCCTAAAGGATCTTTTGAACTTGATCCTGCATCTTTGCCGGAAAAACTTGAATAG 2160 0.4199 MLGKFRHSSNLQPPVSSVHPLRRGLSGVQILYFGSFSNALDQKACFEVLLSLFLMDCNKEEALRAKVIAEKKMESKDFVGARKIALKAQQLYPDLENITQMLIVCDVHCSAEKKLFGNEMDWYGILQIRQSADETMIKKQYRKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDKNKRALLDMKYKVPMNRTSKPYHPPPAQKFRTNVNAGVQNNVRANFSNVNPQKQQQPRQSTQQGPNGSRPTFWTFCPFCCSRYELHSEAVNRSVSCNTCHRPFIAYVLGTSAASAAANSSSQSFGQQKDGFNHGADVGSQGMNAGNVNTKPSAKKGPSISDKLNRKRKRKKVEESSESADSLDSNESEDDMVVDKDGVPGEQNFPTDREQHRRRSARSKPQVVYNENGSDDDDDLSKPSTGAKGSGSCGAEEDNGETAKMNNRNGSAADLKDDQKEVKQKDNRYSEESLHKRNEETMGTRGKEANQCSKGTGETEGTTFFVYPDAEFSDFEKDKKEDSFANGQIWAIYDTIDGMPRFYALIRKVLSPGFKLRITWFEAEPDDEDEISWVENNLPVACGKYVLGNTEISEDRLMFSHLISCEKIGRSTFKVYPRKGETWALFKNWDIKWYTDVESHQMYEFDFVEILSDYVEGEGVSVAYLEKLKGFVSLFARANKGNMDSFRIPSAELFRFSHRIPSFKMTGQERVDVPKGSFELDPASLPEKLE 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1857 719 MobiDBLite consensus disorder prediction 313 329 - -
Lele23g1857 719 MobiDBLite consensus disorder prediction 294 485 - -
Lele23g1857 719 Gene3D DnaJ domain 118 239 IPR036869 -
Lele23g1857 719 MobiDBLite consensus disorder prediction 365 390 - -
Lele23g1857 719 Pfam DnaJ domain 121 182 IPR001623 -
Lele23g1857 719 SMART dnaj_3 120 177 IPR001623 -
Lele23g1857 719 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 55 719 - -
Lele23g1857 719 SUPERFAMILY Chaperone J-domain 117 189 IPR036869 -
Lele23g1857 719 Pfam Domain of unknown function (DUF3444) 494 698 IPR024593 -
Lele23g1857 719 MobiDBLite consensus disorder prediction 222 241 - -
Lele23g1857 719 MobiDBLite consensus disorder prediction 440 473 - -
Lele23g1857 719 PRINTS DnaJ domain signature 141 156 IPR001623 -
Lele23g1857 719 PRINTS DnaJ domain signature 123 141 IPR001623 -
Lele23g1857 719 PRINTS DnaJ domain signature 157 177 IPR001623 -
Lele23g1857 719 CDD DnaJ 121 174 IPR001623 -
Lele23g1857 719 ProSiteProfiles dnaJ domain profile. 121 185 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1857 Lele-ChrLele23 21859366 21863448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1857 58 279 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.921 1.83e-26 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0196 21 1301665 1317273 Lele23g1857 23 21859366 21863448 hybridization
Lele22g0195 22 1228598 1236263 Lele23g1857 23 21859366 21863448 hybridization