Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1851 ATGATCCACGAAAACGTAAAACTCAGAGCAAAAGAACAGCCACCCGCCCCAAACCACCACCAACCTCAGCCGTCCACTTCCCTTTCGCGCAAAACATCTAACCACCACGTCACCCACCACTGCTACCATAACCTACCCATCCAGGTCTCCGCGAAAATGGCAAACCAAGCTCCTTCTACTCCGACACCAGCCAAATCTCCCGCATTGGAGCCGCCGCCACCTCCGCAGTCGCCGCCATCATCGGTCCTCGATCAACCACCGGGGGCTTCTGAAATGGATGTGCAACATCGTCTGTCTGAAGATTCTTCATCTGCTTGGGACCTGGATTGCCTGTTAGATTTCAGCTTGGACGAGAATTTAGCTCTCTCCTTAGACGATTATCATCCTAATTCAGAGGTTCCTCAAAATCTGGAGCTTCCTTCTCAAGAGATTCCTAGTTCCGAGAAGGTTCGCAAGCGAGACCCCAGGTTGACTTGTTCCAATTTCCTGGCCGGTCGGGTCCCATGTGCATGCCCGGAGCTCGATGCTAAGCTTGAGGAAGAAGGTTTTCCTGCTAAGAAGCGCGCTCACACCGTGCGGGCATCGGCTGGGATTGCACGGTGCCAGGTACCTGGGTGTGAGGCAGATATTAGTGAGCTCAAAGGGTATCATCGGAGGCACCGGGTTTGTTTGCGTTGCGCGAATGCTAGTACGGTTATGCTTGATGGGCAGGCTAAGAGATACTGCCAACAGTGTGGAAAGTTTCACCTACTATCAGATTTTGATGAAGGTAAACGAAGCTGTAGAAGAAAATTAGAGCGCCACAACAACCGAAGGCGTAGAAAGCCTACAGAAACCAGAGCTGCAGAAGATCATGAAGTTCAACCTGTCAAACAGACTGAGGATGATGTGGGAAAAGATAGTTCACATTTAAGCAGTGAGATAAACGACATAGAAATTTCCCTGGAGCATGAAGATGGACAACTTACTGCCCCATGTTCGACTCCTGATACCCTGAACATTCAGAATGATAGTTTTGTGTCCTTTGTTGCTTGCGGTGAAACACAAGTGAATGGTGGAAAAGAGAATTCTAACATTTCTTATTCACCACCATATTGTGAAAAGAGTGCTTACTCGTCTATGTGCGCAACTGGTCGGGTATCTTTTAAGCTTTATGATTGGAATCCTGCGGAGTTTCCTAGAAGGCTACGGCATCAAATCTTCCAATGGTTGGCCAGTATGCCTCTTGAGCTGGAGGGTTATATCCGCCCTGGGTGTACAATTCTGACAGTTTTTGTTACTATGCCTAGATTTATGTGGACAAGTTTACTTAAAGACCCTCTGTATTATGTGCAAGACATAGTAGCTCCAGGAAAGATGCTATTTGGAAGAGGCACCATATTTGTTCATCTAAATGACATGGTCTTCTGCGTTTTGAAAGATGAAACTTCTGTGATGGAAGTTCAGATACAGGTGCATGCCCCAAGGCTTCACTATGTTCATCCCACATACTTCGAGGCCGGAAAACCTATGGAATTTGTCGCTTGTGGAAGTAACTTGATGCAGCCTAAGTTTCGGCTTCTCGTATCTTTTTCAGGAAAGTATTTAGAGTGTGAATATTGTATTGCATCTCCTCATAACTGGGCAGGAGACGGCATTTCTTGTGCTTTTGACAGTCAGTTGTACAAGATTTGTGTCCCTCATACAGAGCCAAACATATTTGGACCTGCATTTATTGAGGTGGAGAATGAGTCTGGTTTATCAAACTTCATTCCTGTACTCATTGGGGACGCTGAAATCTGCTCTGAATTGGAGACAATGCAGCAAAAACTAGATATATCTCTTCTTTCGAAACAAATGCAGAATGCATCTGGCAGTTCTATTTGCAGCTTCTGTGAAGCTTTTGCACTGAGACATACAGCATACTCAGACTTACTGTTAGATATAGCATGGCTGCTTAAGGATCCTACTTCAGAAGATTTTCATAGAGCCATGACAGCTTCACAAATTCAAAGATTTTGTTATTTGATAGACTTTCTGATGTGCCATGAATTAATTGCCATTTTGGGGAAAATATTATGGAATTTGAATATTTTGACAGAAAGCATGGAAATGAACAATGTGATTAACAGAATGAGTGAGGCTGACATGGCGTTACTACAGAAACACACTTATCAAGCTAGAGAGTTCCTTTATCAGAAACATCAGAGGGGTGGGGATTTTGTCTTTCACACTGTTTTTTCTGAAATGGAAGGACATAAAGTTGCTCCAAGCTGCTATCAAGATAACATGCCATCAGTTGTCACCGTCAGCAATCAGGGTGCCGAGTCAAGGGCAGACGCTAAATTGGGAGTGAGAAGTCCAGCTTGGGCTGACAAAAGTGAAAGAATACCTCTTTTGGTGAGTGATATTATAATGAACATGGAAGACCTGCCTCAGAGATCTGGTTATCGACATCTCGCGAGGGGATTCTTGTCCTCACGGCCGGCCGTTCTCATGATTGCTTCAGTTGCTGTATGTCTTGGGGTTTGCGCAGCCCTCCTTCATCCTGGGAGGGTCGGTGAGTTTGCAGCATCCATGAGAAGGTGCTTGTTCAGCAATTCGTAG 2586 0.4536 MIHENVKLRAKEQPPAPNHHQPQPSTSLSRKTSNHHVTHHCYHNLPIQVSAKMANQAPSTPTPAKSPALEPPPPPQSPPSSVLDQPPGASEMDVQHRLSEDSSSAWDLDCLLDFSLDENLALSLDDYHPNSEVPQNLELPSQEIPSSEKVRKRDPRLTCSNFLAGRVPCACPELDAKLEEEGFPAKKRAHTVRASAGIARCQVPGCEADISELKGYHRRHRVCLRCANASTVMLDGQAKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRKPTETRAAEDHEVQPVKQTEDDVGKDSSHLSSEINDIEISLEHEDGQLTAPCSTPDTLNIQNDSFVSFVACGETQVNGGKENSNISYSPPYCEKSAYSSMCATGRVSFKLYDWNPAEFPRRLRHQIFQWLASMPLELEGYIRPGCTILTVFVTMPRFMWTSLLKDPLYYVQDIVAPGKMLFGRGTIFVHLNDMVFCVLKDETSVMEVQIQVHAPRLHYVHPTYFEAGKPMEFVACGSNLMQPKFRLLVSFSGKYLECEYCIASPHNWAGDGISCAFDSQLYKICVPHTEPNIFGPAFIEVENESGLSNFIPVLIGDAEICSELETMQQKLDISLLSKQMQNASGSSICSFCEAFALRHTAYSDLLLDIAWLLKDPTSEDFHRAMTASQIQRFCYLIDFLMCHELIAILGKILWNLNILTESMEMNNVINRMSEADMALLQKHTYQAREFLYQKHQRGGDFVFHTVFSEMEGHKVAPSCYQDNMPSVVTVSNQGAESRADAKLGVRSPAWADKSERIPLLVSDIIMNMEDLPQRSGYRHLARGFLSSRPAVLMIASVAVCLGVCAALLHPGRVGEFAASMRRCLFSNS 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1851 861 ProSiteProfiles Zinc finger SBP-type profile. 198 275 IPR004333 GO:0003677
Lele23g1851 861 Gene3D - 197 262 IPR036893 GO:0003677|GO:0005634
Lele23g1851 861 SUPERFAMILY SBT domain 199 279 IPR036893 GO:0003677|GO:0005634
Lele23g1851 861 MobiDBLite consensus disorder prediction 266 303 - -
Lele23g1851 861 MobiDBLite consensus disorder prediction 64 82 - -
Lele23g1851 861 MobiDBLite consensus disorder prediction 276 303 - -
Lele23g1851 861 Pfam SBP domain 201 275 IPR004333 GO:0003677
Lele23g1851 861 MobiDBLite consensus disorder prediction 53 100 - -
Lele23g1851 861 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 95 667 IPR044817 GO:0003677
Lele23g1851 861 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1851 Lele-ChrLele23 21822365 21828605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1851 91 854 SBP-box Gene Family AT5G18830 45.704 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele23g1851 SBP 5.5e-28 No_clan